Chondrus crispus (carragheen): CHC_T00005569001
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Entry
CHC_T00005569001 CDS
T02916
Name
(RefSeq) hypothetical protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
AWS
Motif
Other DBs
NCBI-GeneID:
17324432
NCBI-ProteinID:
XP_005716732
UniProt:
R7QGN1
LinkDB
All DBs
AA seq
2211 aa
AA seq
DB search
MTKIGKADKKEALKMRTNLATFRGCEELSHISLTAYLRTLASAHHVYISSAVRDGEDKSL
VQNGLDTLERDMTDAEFTESMFKDGRRSRRREQKIAPYISKTIDIIQLIFRLWQRMSCAE
DSLAQAFTTRLYVCGVVQSVSSLAYEILSLWHTNAKVTEPGSLKRSELVEFCVRILSTVL
VYELSPVSGIWGNVKSGFVFKAKTANGEPWLPKLLESILYLVDREEMTTTRECRLAAGEL
YQLYVVRCHCPFPSASEQKQIWDEGLHMRAEQLSTLISSDTFWSTAVGSAMQTIRKQEDT
PDADFAITFLHSLLSEGAAAKSLVQKQTTHRDVLLGVLAKLLERLDRQLLSAFVQIERSN
RSTPVLPSSVDLIRKLMSSAVLQRELISSRERERRRTYLDAIASILSRLAKLVPGEIEND
KLMVYAREGAFSGISEKLLTELPADIAISRFMPEVSDSDADDPNTLKDCQAARMKALAFG
AWLVGALGKSMEDGSRDMTQMNGLQILLSSRFNSTRALKKLWRILFKIQAGLEHDVRGTL
VGSLAKRTALLAENERGHFCMAVEAVRLKVISEPKDRIARHTPDSTPKQTPRQSSSEGET
ENDSKQSNESGAFPDVTQIKDLRRAVASHLGCAHFDQDLQMLGLLEKTYKSRGEQTLARY
DSSSEYVSHYHRLPKKNSYLEGAREFLDRAEKTVGQKCGCIPGNPVRGSTDSQMRIACSN
NLCENRSTHVECAPDKCGAGAYCQNQRMQRMQYAKMKKVPFPGKGMGIVADEDIAAGSFI
GEYQGEIISMKMFEKRKREYQGERHFYFMTLTSKLVIDASRKSQITRFVNHSCEPNAETQ
KWNAGGEPRVGIFALKDIGKSDEITFDYGARSLANDTVPCLCGAKSCRGFLTMRKKPDSA
KEGEGEAIFDTSTFVNAVADMKALGVADKVDGVSSKTTGESTPTSHSRKLQQSVHEKIKR
GKKDLEIATEFTNLCQEMDEALKPFDESNLEGPLKKKLSDWVLGVKNASKNRKDKHAQTN
AASKPEARVRIPRRSEPPRKESFLESYLRKESEARKSSKAGAAKRRDFSKPFPRKPPTHN
SSSAHKFYSPSRQDATARQPRRSYEPQRDRRPASLLERKDPDDMMVDIYGSRSAKRTPPA
EYKAFDRSGPMPAFLPTAPKVKKPLLKPKVAKKEKPKRDDSDVDSMDDYSIASSAEPVIE
DDPPLSPSNLPDGLGACSDDEFVEAPPLDGPPPRHPEDERADPRSRGFAGEHGRDHARGF
NLGGDRRRLPDPGVDVRGIRHGEHPDRFRRWPEDHVVRSNHNPLERNVRADRSVGGHRMD
SRRPEDYGRRRSGPEYDRLPHNDHLAGAHSQAQVRDMGPPQNPRLVAEARGPRGSREDRF
RPQGHRPPRETVPSRSADRPWINSGPRGYDRGRPLPGSEPEINPRSKGNHVHGPRGHSEM
REFGHLEHGDGRGPVSEKHPPRGGHSMPPPRRDSWGRQGSHGFPPRAGDVHPAELGSREG
DHRDGRASRWRDDRHSNTALLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDPD
QGPISRRGERRSLGSAVGALPSLRSESGANESPRRDSRAGGAATRHSMSSPRQRPRGEPM
TSSEARGQSPPRDLRDGKERDEAMRRASVPGPRRQSREELTRAETSVGPVSHHQKERVAM
KEMGHAHAVHSGMKLSQDANRSDVKSISHEKKPDRDVGKRLTTSKMGESVEASQKDVKVV
PGGDDKGKSEVKGNETVVHGSKTESSKESVKSTGEEGRSVSTEAKNEEKRTVAKGRSRFS
AQKNETELRGSGRLGESATAIANASEGKDGQRDGGRDAVQDAGVTSKQQQKGNGPHVSSN
SRSGADVNSQSKMDVKANGGGGSGQAENFTSIKSVQHDGGRPHGHVGLGGRMERNKSSGR
FGFQGSGRMQNATHEKWKRIDGPKSRNDEARRAVFSGGGPSGPTKGIGPSKPTKAGNESG
MEKVEGLGWRAQKDAGSMEKGGMLKADKMAGHDGGRNSRGFPGPGLDEQRRGMARSSSSG
WRKERDGKSSHEDVRESKGGGCREGAGASEKEKSVMKRIGRRPDGAADGVSEAPRGLDIA
RRIGGKVASRHGDEGYEKRRRSENWHEPGRKRFRRDDATSPRRDAAQRRRSMEASGARPA
KRGHSERWEPEHRHAPRGGDKLKAKPMFVKEAEARAPKAKKTDLRRLIRKR
NT seq
6636 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagattggcaaggccgataagaaggaagccctcaaaatgcgcaccaatttagca
acattccgcgggtgcgaggagctaagtcatatcagtctaacggcatacctccgaactctc
gcgtccgcgcaccatgtctatattagctccgccgtccgcgacggtgaggacaagtcgctc
gttcaaaatggcttggatacccttgaacgagatatgactgacgccgaatttacagagtcc
atgttcaaggatggacgccgcagtcggcgacgggagcagaagatcgcgccgtacatttcc
aaaacaatcgacatcattcagctaatttttcgcctctggcagaggatgtcgtgcgcggag
gactctcttgcacaggccttcacgacgcgcttgtacgtgtgcggggtagttcagtcggtc
tcaagccttgcatatgagatattgtctttatggcacacgaacgcaaaggttacagagcca
ggcagcctgaaacgtagcgaattggttgaattctgtgttcgtatcttatccactgttttg
gtgtacgagctgagccctgtctcaggaatatggggaaatgtgaaatcaggcttcgtattc
aaagccaaaacggcaaacggagagccgtggctcccgaagctcctggaatcgattctctat
ctcgtggaccgcgaggagatgaccactaccagagagtgtcgtttggcagctggagagctt
taccagctctatgttgttcggtgtcactgcccttttccgagtgccagcgagcagaagcag
atatgggatgagggtctgcacatgagggctgagcaactgagtacgctgatttcgagcgac
actttttggtcaactgctgtcggttcagcaatgcagacgatacgaaaacaggaagacact
cccgacgcagactttgcaatcacgtttcttcattcccttttgtctgaaggggctgcagcg
aagagcttggtccaaaagcagaccacccatcgcgatgttctgttgggtgtgttagccaaa
cttttggaaaggttggatcggcaactgctgagtgcttttgttcaaattgagagaagcaac
aggagtaccccagttttgccgtcttccgttgacctcattcgcaagcttatgtcatccgct
gtattgcagcgtgaactgataagcagccgagaaagggagcggaggcgaacttaccttgat
gccatagccagcattctttcccggttggcgaaactcgtacccggagaaatagaaaacgac
aaattgatggtctacgcgcgagagggtgcctttagcggaatatcggagaaactgctgact
gagctacccgcagatatcgcaatctctcgcttcatgcctgaagtgtctgacagtgacgct
gacgatccgaacactttgaaggattgccaggctgccaggatgaaggctctcgcgtttggc
gcatggctcgtcggtgctctcggcaagagtatggaggacgggtctagggatatgacgcaa
atgaacggacttcaaattctcctatcgtcccgtttcaatagcacgcgtgctttaaagaaa
ctttggagaattctctttaagattcaggctgggcttgagcatgacgtgcgcggcaccttg
gtgggcagtcttgcaaaacgtaccgcgctactggctgagaatgagaggggtcacttttgc
atggcggtggaggcggtacggttgaaggtaatatctgaaccgaaggatcgcatcgcccgc
cacaccccggacagtaccccgaagcagacccccaggcaatcctcatcagagggagagact
gaaaacgattcaaagcaaagtaacgaaagtggcgcttttccagatgtcactcagatcaag
gatctccgcagggctgttgccagtcatcttggatgtgcacattttgaccaggacctgcag
atgttgggtcttttagaaaagacgtacaagagccgcggagagcagactctagcgagatac
gattccagtagcgagtatgtttcacactatcaccggctaccgaagaaaaattcttatctt
gaaggtgcccgggagtttctagacagggcggagaagacagttgggcaaaagtgcggttgc
attcccggcaacccagtgcggggtagcactgattctcagatgagaattgcctgctcgaat
aacctttgcgaaaaccggtcgacccatgtggagtgcgcccctgacaaatgtggagcaggt
gcttattgtcaaaatcagagaatgcaaagaatgcagtacgcgaagatgaagaaggtaccg
tttcctggaaaaggaatggggatagtcgcagatgaagacattgccgctggttccttcatt
ggggaataccagggagaaatcatatccatgaagatgtttgaaaagcggaagcgagagtat
caaggcgaacgccatttttacttcatgactctgacttcaaagcttgtcatagatgccagt
cgaaagtcccagatcacgcgatttgtgaatcattcctgtgaaccgaatgctgagacgcaa
aagtggaacgctggaggagaaccacgagtggggattttcgctctaaaagatattggaaag
tcagatgaaatcactttcgactacggggccagatctttggcgaatgacactgtcccgtgt
ctctgcggggcaaagagctgtcgcgggtttttgaccatgcgaaagaagcctgacagtgcg
aaagagggcgaaggcgaagccatcttcgatacatcaaccttcgtcaatgccgtggctgat
atgaaagctttaggagtcgctgacaaggttgacggagtttcttcgaagactaccggtgag
agcacccccacgtctcactctcgaaagctacaacaaagtgtacatgagaaaatcaagagg
ggcaaaaaagatctggagatagcaacagaattcacaaatttgtgtcaggaaatggatgag
gcgttaaagccttttgatgagtccaacctcgaaggtcctcttaagaagaaactttctgat
tgggtgctaggagtgaaaaatgcttcgaagaatcgcaaggataaacatgcgcagaccaat
gctgcttcgaagcccgaagcaagggttcgtatcccgaggcgttcagagcctccgagaaaa
gaatcgtttttagagtcatacctcagaaaagaaagtgaagctaggaagtcttccaaagct
ggagctgcaaaacgcagagacttctcgaaaccattcccaaggaagccccccactcacaac
tcttcatctgcacacaagttttactcgccatcgaggcaggatgcaactgctagacagcct
cgacgctcctacgaaccacaaagagatcgaagacccgcttccttgcttgaacgtaaggat
cctgatgacatgatggttgatatttacggctctcgttctgcaaagcggaccccacccgct
gagtacaaagcttttgataggtcggggccaatgcctgcgtttttgcctaccgcaccaaaa
gtgaaaaagccgttgctcaagccgaaggttgcgaaaaaggagaagccgaagcgtgatgat
tcggacgttgactccatggacgactactctattgcttcatctgcggagccggtgatcgaa
gatgaccctcccttatccccgagcaatcttcccgatggactcggtgcctgctcagacgat
gagtttgtggaagcacctccactagacgggccaccaccacgtcacccggaagatgaaaga
gctgacccacgatcacgaggctttgcaggcgagcacgggcgggaccatgcacgtggattt
aacctagggggtgacaggcgtagactccctgatccgggcgtggatgtacgaggaataaga
cacggtgagcatcccgatcgtttccgccgttggccggaggaccacgtcgttcgcagcaac
cataacccgctggaacgaaacgttagagccgatagatccgttggtgggcatcgaatggat
tcaaggcgtcccgaggactacggtcgacgacgctccggtccagaatatgatcgacttcct
cacaatgaccatctagcaggcgcacacagtcaagcacaagtgcgggacatgggcccccca
cagaatccacgcttggttgctgaggcccgtggtccgcgcggttcgcgcgaggatcgcttc
agacctcaagggcaccgcccacctcgagaaaccgttccatctcggtccgccgataggcca
tggatcaattcggggccaagaggctacgatcgagggcgacccctaccgggatcagagccg
gaaatcaatcctcgcagcaaagggaatcacgttcacggcccacgtggacattctgaaatg
cgggagtttggccatttggaacacggcgatgggagaggaccagtatctgagaagcatcct
cctcgcggtggtcatagcatgcctcccccgcgccgagatagctggggccgacagggaagc
cacggttttcctccgcgcgctggagatgtgcatcctgctgaactagggagtagggaagga
gaccatcgagatggccgagcttcccgctggcgagatgacagacattccaatactgcgctt
ttgagggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcccgatccagac
caaggcccaatttctcggcgaggtgaacgacgaagtctgggaagtgcggttggtgcactc
ccttcccttcgaagtgaatcgggcgcaaacgaaagtcctcgacgagatagtcgagctgga
ggtgcagcgacaaggcattcaatgagtagtccgcgtcagcgaccccgaggagaacccatg
acaagtagtgaagcgagggggcaaagccctccgcgtgacctgcgagacgggaaagaacga
gatgaggcaatgagacgggctagtgttcctggcccgaggcgacaatcacgagaggagctg
accagagctgagacaagtgtcggtcctgtttcacatcaccaaaaagaacgggtagctatg
aaggaaatgggacatgcgcatgctgtacattcaggaatgaagctaagccaagatgcgaat
cgaagtgatgtgaagagtatctcgcacgagaagaaacctgacagggacgttgggaagaga
ttgacaacttcgaaaatgggagaaagcgttgaagcgtcgcaaaaggatgtcaaagttgta
ccgggaggtgacgacaagggaaaatccgaagtgaaaggcaacgaaacagtcgtacatggc
tccaagactgaaagttcaaaggagtctgttaagtcgacaggagaagaaggccgaagtgtt
tccacagaagcaaagaatgaggaaaaaaggacggtagcgaagggaaggagtcggtttagc
gcacaaaagaatgagacggaattgcgagggtctggacgacttggtgaatctgcaactgca
attgcgaacgcaagtgaaggaaaagacgggcagagagatggaggtcgtgacgcggtgcag
gatgcgggggtgacatccaagcagcagcaaaaaggcaacggtccccacgtcagttcgaat
tcacgcagcggagcagatgtgaactctcaaagcaagatggatgtaaaggcaaacggtggt
gggggctcagggcaggcagagaactttacgagcatcaaatctgttcaacatgacggtggc
aggccgcatgggcacgttgggttgggtggcagaatggagaggaacaagagctctggaaga
tttggtttccaagggtctggtagaatgcagaatgctacacacgagaaatggaaaaggatt
gatggcccaaagagccgaaacgatgaagcacgccgagcagtgtttagtggaggtgggcct
agcggccctacaaagggaattggaccaagcaagcccacgaaagcaggtaacgagagtgga
atggagaaagtagaaggtttgggatggcgagcacagaaggatgcgggatcaatggaaaag
ggtggaatgttgaaggcagacaagatggccggccacgatggaggaaggaacagccgaggt
tttccgggaccggggttggacgagcaacggcggggcatggcgaggtccagcagcagcggg
tggcgaaaagagcgggacggcaagtcctcacacgaagacgtgcgagaaagcaagggtggt
gggtgtcgagaaggtgcaggagcatcggaaaaggagaaatctgtgatgaagcgaattgga
cgtcggccggacggggcagcggacggtgtcagcgaagcgccccgtgggctggacattgcg
cggcgcatcggcgggaaggtagcgtctcggcacggggacgagggctacgagaagcggcgt
cggtctgaaaattggcatgagcctggtcgcaagcggttccgtcgcgacgacgcaacaagc
ccgcggcgggacgcggcgcagcggcggcgctccatggaggcgtctggggcacggccggcg
aagcgcggccacagtgaacggtgggagcccgagcataggcacgcgccgaggggtggggac
aagctcaaggccaagcccatgtttgtgaaggaggccgaggcgagagcaccaaaggcgaag
aagacggacttgagaaggctgatcaggaagaggtag
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integrated database retrieval system