Chondrus crispus (carragheen): CHC_T00005805001
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Entry
CHC_T00005805001 CDS
T02916
Name
(RefSeq) hypothetical protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40
Motif
Other DBs
NCBI-GeneID:
17325176
NCBI-ProteinID:
XP_005717460
UniProt:
R7QHN9
LinkDB
All DBs
AA seq
1276 aa
AA seq
DB search
MNLAVMEKNSKAVCPELRAFSDCVDVAEAGHEQLHKHGRLSLFESRVLPSGRGRIAYVGG
SVSALSFHPWAKGICAVAAHRSDQPTHRILKCYAGSGHIQLWRFAENDTRCLGLVEHNGE
CVWDLKWRPEQSQRDGSTGWEGTLAAALGDGTVLVSKIDSFTKVSHGAEKDAIKTLYPTS
TLLRVNKSIASRSPVRVVEWSKEGNLLVVGCADGSIEVYDATSVDRTWPRWSIPGHESVV
VDLRWLSETHLCSLGLSCVLRLRDIRDPVSTLEQNMEGLSGSMSMDAPEPNVAIIGGDYG
YLRVVRLSGVDGMMPQRSVKRVRLQSGSFRDMCSVPISGQEADSCSQTLFYTGGADGMLH
ECKFPRPIWTSANECEIGKTQVGERLRWTQTTEIKEGGEEIRTLRLQLRNSLASGGQELS
HGSLLDTENGGLGGTLVDTLLQETSTSSASRKPKRSRTVGREGLADAYSRFGAQYKELAG
VTRTSLSVPSDILAVGISGGLVTWVPLSLDAHKRDARIRHAYQQTPTSSSATKPPRKRGR
PRKIPTVLLQSAGMSSMNMSDTASASRALGTAESESPVVRTLPEKTSPTSTTRIPTPPAS
YSTDAAGLVAGPSRETSPLKPSSPKRRRSSPRTAQVATEPRRKRGRAKKGSDEADLKSSD
SANKTHMGQSDSLSNEGVTMGEEIGTANDMGKNVHATDRGDDTEMESKPEKVIQGTVRNA
KDKPITDKAVEQQVMSKDDKPPGLGALGPAEVRRTSVSAKEHLQVEAQNGKEAADEDTEA
LHLNDESIQAQNASGKATMSKASTKRARAEAQALGVATRRSPRTRRQEISSTPARRGGSL
DAAPNTKPNLSEENATAPPRAADTRVGAGEVLGKNAREETGKAAIPKTTVANSNRARGRI
KVAKIGETARSRSPLNRPALPLHAAAKTAPHAGDSAVDHDMQIAHSSPPQHATPWPDVGK
MLPPPITGQTPVTQGSKLAVGAAGEQKQKRVGQENGAATNDTVAQKDDESSMPTATASPD
GKLDPSETTQKGPSSLVPTGDRIPAATISKSTKEDAATEPARKRQRSDSVPVQDAHVQPL
QPGDYPGASHPCRCRVRVRAQRAEQAVRLRVRAPSGDTPPRRSARTRTRRAALDEDVGPP
RGRRAPRKRSVKLMLRIAEPVALTDSEGEAEPVTRVPVRLRVREGGAVRRAMSREEEWGE
PDVKESAARRGPPVEGIDEEAANSAAMGDGGRGVGRKGVLGEVNGYGEEMGVEELELDGS
SGSRTRRVRKPSWKLA
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggcggtgatggagaagaattcgaaagccgtctgcccggagttgcgcgccttt
tcagactgcgttgatgtcgcggaagccggccatgaacaattgcacaaacacggacgctta
tcacttttcgaaagccgtgtgctgccgagcggaaggggaagaattgcgtacgtcgggggt
tctgtaagcgccctgagtttccatccatgggcgaaaggtatttgcgcagttgccgcgcac
cgcagcgaccagccaactcacagaattctgaagtgctatgcaggctctgggcatattcaa
ctctggagatttgctgaaaatgacacgaggtgtcttggcctcgttgaacataacggtgag
tgcgtttgggacttaaaatggaggccagagcagtcgcagagggatgggagcacagggtgg
gagggcacgttagctgccgctcttggtgatgggacggtccttgtgagcaaaatcgattcg
tttacgaaggtttcacatggtgcagagaaagacgctatcaagacactctatcccacatcg
acgctgttacgtgtcaacaagagtatcgcgagtcgaagccccgtgagagttgtcgagtgg
tcgaaggaaggcaatctcctagttgtagggtgtgcagatggaagcattgaggtctatgat
gccacatccgttgaccgaacatggccgaggtggtctattcccggccatgagtctgtggtg
gtcgatcttcgatggctgtctgaaacacatttgtgcagcttgggtctgtcgtgcgtgctt
cgtttgcgcgatatacgcgaccccgtctccactttggaacagaacatggaagggctcagt
gggagcatgagcatggatgccccggaaccgaacgtcgctatcatcggcggtgactacgga
tatctacgagtagtgcgtctcagcggtgtggatggtatgatgccgcagcgttccgtcaag
cgagtgcgactgcagagcggatcatttcgggacatgtgctctgttccaatatctgggcaa
gaagcagactcctgttctcagacattgttctatacagggggagctgacggtatgctgcac
gaatgcaagttcccgcggcctatctggacatctgccaacgaatgcgagattgggaaaacg
caagtaggagagagactacgatggactcagaccactgagatcaaagaaggaggcgaagaa
ataaggaccctacgattacagctgcggaatagcctagcttctggcggacaagagttgagc
catggttctctacttgacacggaaaacgggggcttgggtggcaccttggtggatactctg
ctgcaggaaacttctacttcgtcagcttcccgcaagccgaaacgatcacgaacggttggt
cgagaaggattagcagatgcatattcccgtttcggcgcacagtacaaggagctggccgga
gtaactcgcacaagtttatccgtccccagtgacattctggctgtgggtatatccggagga
cttgtgacttgggtgccgttgtcgctggacgctcacaagagggacgcacgcatccggcac
gcataccaacaaacccctacgagtagtagcgccaccaaaccaccacggaaaaggggacga
ccgcgaaagatacccacagtgctgttgcaatcggctggaatgtcgagcatgaacatgtcc
gacacagcatcagcgagtcgggcgctaggcactgcagaatcagaatctccagtggtgcgt
actctgccagagaaaacctctccgacaagcactacgcgaataccgaccccacctgcaagt
tactcgacagacgcggcaggattggtcgcggggccatcacgcgagacttctcctctaaaa
ccgagctctccaaaacgcagacgcagcagccccagaactgctcaagtggctactgaacca
aggagaaagcgtggacgggcgaagaagggctcagacgaagctgatcttaaatcctcagac
agcgcgaataagacgcatatgggccagtctgatagtctctcaaatgagggagtcacgatg
ggcgaggagataggaactgctaacgacatgggaaagaacgtgcacgctacagatagggga
gacgacacggaaatggaaagcaagccagaaaaagtcatccaaggaaccgtccggaacgcc
aaagacaagcccatcacagacaaggccgtcgagcagcaggtcatgtccaaggatgacaaa
ccccccggtttaggagcactgggtcccgctgaagtcagaaggacatccgtgagcgcgaaa
gagcatctgcaagtggaagcacaaaacggaaaagaagccgctgacgaagacacggaggct
ttgcatcttaacgacgagtctatccaagcgcagaacgcgagcgggaaagctacaatgtca
aaggcatctacaaaacgcgcgcgagccgaggcgcaggcactgggcgtcgccaccagacgt
tcacctcgcacacgtcgccaggaaatctcaagcactcctgctagacgcgggggcagcctt
gacgcggcgcccaacactaaaccgaacctctccgaggagaatgcaaccgcgcctccgcgt
gcagcagacacacgcgtaggagcaggagaggtgctgggcaaaaatgcgcgggaagagacc
gggaaggcggcgattccgaaaacgacagttgcaaattcgaatcgcgccaggggtcgcatc
aaagtcgcgaaaattggcgagaccgcccgcagccgctcgccactcaaccgtccagcccta
ccgttgcacgcagccgccaaaaccgcaccccacgccggcgacagcgctgtcgaccacgac
atgcagatcgcgcattcaagcccgccgcagcacgcgacgccgtggccagacgttggcaag
atgctgccgccgcccatcacaggccagacaccggtcacgcaaggcagcaaactggcagtg
ggcgcggctggggagcaaaagcagaagagggtcggacaggagaacggggctgcaacaaac
gacacagtcgcccaaaaagacgacgagtcctccatgcctaccgccacggcatctcccgat
ggcaagctagacccctccgagacaacgcagaagggcccttcctcactggttcccactgga
gacagaatacctgccgcgacgatctccaagtcgacaaaggaagacgcggccaccgaacca
gccaggaagcggcagcggagcgactccgtgcccgtgcaggacgcgcacgtgcaacctctg
caaccgggcgactatcccggcgcgtcacacccctgccgctgccgcgtgcgcgtccgggcg
caaagggcggagcaagcggtgcgtctgcgggtgcgggcgccctcgggcgacacgccgccg
cggcggagcgcgcggacgcggacgcggcgggcagcgctagacgaggacgtcgggccgccg
cgcggaaggcgcgcaccgcgcaagaggtcggtcaagctcatgctgcgcattgcagagccc
gtcgcgctaacagactccgaaggcgaggcggagccggtgacacgggtgcctgtgcggttg
cgcgtgcgcgaagggggggccgtgcgcagggccatgtcgcgcgaagaggagtggggagaa
ccggacgtcaaggagagcgcggcgcggcgaggaccgccggtagaggggatcgacgaagag
gccgccaacagtgcggcgatgggggacggtgggcgcggagtgggaaggaaaggtgtactg
ggcgaggtgaatgggtatggtgaggagatgggggtggaagagcttgaacttgacgggtcg
tcagggtcgcgcaccaggcgggtgcgcaagccatcatggaagctcgcgtga
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