Chondrus crispus (carragheen): CHC_T00007675001
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Entry
CHC_T00007675001 CDS
T02916
Name
(RefSeq) hypothetical protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
Motif
Other DBs
NCBI-GeneID:
17319068
NCBI-ProteinID:
XP_005711359
UniProt:
R7QUQ4
LinkDB
All DBs
AA seq
1129 aa
AA seq
DB search
MSGAARLDSNENKERANSKSQNTQIVQFYLSPRFEREHKSTINKAATSRAPSARAFLRRR
PSQCHVRQQHAHEGHEFLHARAVLRDHLHHARLVLRIVHQRRERLLGRVMPLCHLEHDVH
IDGKALPGAVPHALAHVLVLKNAAEQVQQRAGLLAHAHRGDGALLARRHDAAVGHAEVAQ
LHVCPRLVLRGRQPRVHEMVAQTDEVLRPAHVRRVVVHAVPVAELAQVARLRAERAQEED
ERLQLRVLKRAAHERAYHRGRRGRLRTGRRRRHRAGSRAAKKGGRWGGLTVYVSYTYSTR
GGVCPRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPPPPSPPPPPAAMLAFAAS
PGVHRLLPNHVTTPSVASTLAARRRAFVSPHAPALRQRRAAHASFVRMAAAGAGAGAGPS
AAQAQTPPTAVMGSDAELDTKYRNWRVRIFSSIFSGYASFYLTRNSFTYVAPVMREALGF
SLEQLGIIMSVFPLAYGFSKLLAGILSDRFSTRIFMSVGLALTGVINILFGFQTSLYAFI
ALWLANGFFQAAGAPPCAKLLTMWYSRSERGTWWGFWNTSHNTGGFLIPLLAGYCARAFG
WQYGMIVPGIVSICMGLFLFNRLRDSPEAVGLPPVDVYRDDVAPEDIAKAASNQVEEKLS
AKEKLFKYVLSNPYVWLLGFSYFFVYFVRAGVSSWAHIFLLDFKGVANAQEAAFRVSGME
IGGLMGSLVAGWASDKMMRGRRIPVIVLWLAGVMASVAGLWFVPVTWRYVNWLIVFCIGF
FIYGPQMLVGLAGAEIVDKSAVSSTIGLLGWIAYLGAAVSGYPLTKIVTKLGWGAYFASL
IGFAAIAILLLLPMWRLGMGDKTKPVPAVVPAAKEGGLVTSTAQLGSAVGTLVPAGGPVK
FVECKTCAGTGNVMKLECGPATPSQSVSCRFMETPCPWCGASGYLPEAR
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgcggcgcgactcgactccaacgagaataaggaaagggcaaatagcaaatca
caaaacacacaaattgtacagttttatctctcgccgcgcttcgaacgcgagcacaaatca
acaataaacaaggcggcgactagccgcgccccttcagcgcgcgcctttcttcggcggcgg
ccctctcaatgtcacgtaaggcagcagcatgcgcatgaaggccatgagttcctccacgct
cgcgccgtcctccgagatcacctccaccacgcacggctcgtgctgcggatcgtccaccag
cggcgcgagcgactccttggacgtgtcatgcctctttgtcatcttgagcacgatgtacac
atcgacggtaaagccctgcctggtgcggtaccgcacgcccttgcgcacgtactcgtactg
aaaaacgcagccgaacaagtccagcagcgcgcgggcctccttgcccatgcccaccgtggt
gatggtgcgcttctcgcacggcgccacgacgcggcggtcgggcacgccgaggtagcgcag
ctgcacgtctgcccacggctcgtgctgcgcgggcgacagccccgggtgcacgagatggtg
gcgcagacggatgaggttcttcggcccgcgcacgtccggcgggttgttgtacacgcggtc
ccagtcgccgaactcgcccaggttgcccgactccgggcagagcgagcgcaggaggaagac
gagaggcttcagctgcgggttctcaaacgtgccgcgcacgagcgtgcgtaccaccgcgga
cgacgggggcgccttcgaaccgggcgtcggcgtcgccatcgcgcgggatcgcgggctgcg
aagaagggggggaggtggggggggctgactgtatacgtgtcgtacacgtatagtacacgt
gggggcgtgtgcccccgtaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccct
tcccccccccccccctcccccccacccccccccgccgcaatgctcgccttcgcagcttcg
cccggcgtccaccgcctcctgccaaaccatgtgaccacgccgtccgtcgcatcgacgctc
gcggcccgccgccgcgccttcgtgtccccgcatgccccggcgctacgccagcgccgagcc
gcgcacgcctcgttcgtgcgcatggccgcggccggcgcgggtgcaggggcaggcccgagt
gccgcacaggcacagacccctccaacagcagtcatgggctcggacgccgagctggatacc
aaataccgcaactggcgcgtccgcatcttctcctccatcttctccggctacgcctccttc
tacctcactcgtaactccttcacttatgtcgccccggtcatgcgcgaggccttgggcttc
tccctggagcagctcggtattatcatgagtgtcttcccgttggcctacggtttttccaag
ctgctggccggtattctgtccgacaggttctctacccgtatcttcatgtccgttggactg
gctctcaccggcgttattaacattctatttggctttcagactagtctgtatgcctttatt
gctctctggttggcaaatggcttctttcaggctgctggcgcaccgccctgtgctaagctg
cttaccatgtggtactcaaggtcggagagaggcacatggtggggcttctggaacaccagt
cataacacgggtggttttctgatccccttgctggctggttactgtgctcgtgcctttgga
tggcagtacggtatgattgtccctggtatcgtctccatctgcatgggcctcttcctcttc
aacaggctaagggatagccccgaggccgtcggtctgccccccgtggacgtctatcgcgac
gacgtcgccccggaagatatagcgaaagccgcttccaatcaagtagaagagaaactttct
gcaaaggaaaagctcttcaagtacgtcttgtcaaacccctatgtctggctccttggcttc
agttacttcttcgtctactttgtgcgtgcaggtgttagcagctgggcccatatattcttg
cttgatttcaagggcgttgccaatgcccaagaggccgcattccgtgtcagtggcatggag
attggtggtttgatgggctcgttggtggccggctgggcgagcgacaagatgatgagaggc
cgtcgcattcccgtcatcgtcctctggcttgccggtgtcatggcctctgtcgcgggcttg
tggttcgtacccgtcacctggcgctacgtcaactggctcatcgtcttttgcattggcttc
tttatttatggaccccaaatgctcgtcggcctcgcgggcgccgaaatcgtcgacaaatct
gctgtgtcctccacaatcggattgcttgggtggatcgcgtacttgggggctgccgtgtct
gggtatccgctcaccaagatcgttaccaagctaggatggggggcctacttcgcctctttg
atcgggtttgctgctattgctatacttctcttgctgcccatgtggaggctgggtatgggt
gacaagacaaaaccagtgccggctgtcgttcctgccgccaaggaaggcgggttggttacg
tcgacagcgcagttgggctcggcagttggtactttagtaccagctggtggtcccgtcaag
tttgtagaatgcaagacatgtgcaggaacgggtaatgtgatgaagctagagtgcggccct
gcgacgccgtcgcaaagcgtgagctgccgcttcatggagacaccgtgcccatggtgcggg
gcatccggatatttgccagaggcgcggtga
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