Chondrus crispus (carragheen): CHC_T00007801001
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Entry
CHC_T00007801001 CDS
T02916
Name
(RefSeq) hypothetical protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrase_H2C2
RVT_1
RT_RNaseH
RT_RNaseH_2
zf-H2C2
rve
Motif
Other DBs
NCBI-GeneID:
17319283
NCBI-ProteinID:
XP_005711582
UniProt:
R7QUC1
LinkDB
All DBs
AA seq
542 aa
AA seq
DB search
MVCDYRALNRIKISDSKPLPLIDETLDQVAGARIFSQIDLIGAYHQMRIRDLDCPKTAIR
TRFGTFEWREEHKQHLRSLFKILRANKLYVRSSKCHIGVSEVDFLGYHVSSRGVSMQRRL
VDAIIEWPAPTSAQECGHPVAFLSHRLSNTETNWDTGDQELLAFIIAFREWSHRWLDTLQ
EFSYDVEHIPGRLHTVPDALSRRPDHMKNTLSFKHMQLKDPGIINQIQEGYRCDEWAQTI
ITAAKIQVPNYKYPNGLLYWQGNGNCRLYVPSAGDLRQSIIHDFQKTGHLGLDKTYNFCA
PQMYWPKMYQAITKFVTACKECQINKTPHSSKPGLLQPPEIPTRCWDIVTCDFLTELPKT
NRGFDAILVIVDKLSKRALFEPLKNHAQRQTCFKISTIDSSRSAELNLSTAHHPQTDGQS
ENLIRTLSSMLRHSIQRAPNEWDTILSNFDYVYNGSKNSSTGLAPFEIDLGRILHAPMTR
PLTDCTIQCAGAIETSERRKAFNQIAKEDLANARARQKFYADKTRVDLRFNEGDLVMLRT
EG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggtctgtgactaccgcgccctgaacaggattaagatttctgattcaaagcctttgccg
ttgattgacgagaccttggaccaagttgcaggagcgcgtatattttctcaaattgacctt
ataggagcctaccatcaaatgcgcattcgcgacttagattgcccgaagacggcaattcgt
acgcgcttcggaactttcgaatggcgggaagaacacaaacaacacctccgtagtttgttc
aagatattacgcgcaaataagctctacgtgcgtagctccaaatgtcacattggtgtaagt
gaggtcgactttctgggataccacgtcagctcccgaggagtatctatgcagcgcagactt
gtcgatgccataattgagtggcccgcccctacatcagctcaggagtgcggacatccagtg
gctttcttatctcaccggttgtcgaacacagaaacgaactgggatactggagatcaagaa
ctcctcgctttcatcatcgccttccgagaatggagtcatagatggctagacacgttgcaa
gaattttcttatgatgtggaacatatccccggtcgtcttcatacagttcctgatgcgctg
agccgtcgaccagaccacatgaaaaataccttgtccttcaagcatatgcaattgaaagat
ccaggaatcattaatcaaatacaggaaggataccgttgtgacgagtgggcgcagacaata
attactgcagcgaaaatacaagtacccaactacaagtatccgaatggtcttctatactgg
cagggaaatggcaactgtcgtctatacgttcctagtgcaggagatctccgccaatccata
atccacgattttcaaaagactggtcatcttggactggataagacgtacaacttttgtgct
ccccaaatgtattggcctaagatgtaccaagcaattacaaaatttgtcacagcatgtaag
gagtgccaaattaacaagacaccacattccagcaaaccaggattacttcagcctcctgaa
atacccaccagatgctgggacattgtcacttgtgattttctcactgaacttccaaaaacc
aatcgagggttcgatgcaattcttgtgattgtagacaagttatctaagcgggcacttttc
gaaccgctaaaaaatcatgctcagcggcagacgtgtttcaaaatttcaacgatagactct
tcgcgaagcgcggagctcaatctaagcactgctcatcatccacaaacggacggtcaatcg
gaaaatcttattcgcactctatcgtctatgttgcggcattcaattcagcgagcccccaat
gaatgggatacaatcttaagcaatttcgactatgtttacaacggttccaagaacagcagt
acaggtctagcgccatttgagatagaccttggccgcatactgcacgctccgatgactcgc
ccccttacggactgcacaatacagtgtgcaggcgctatagagacctcggaacgtcgcaaa
gcattcaatcaaatcgccaaggaagacttagctaatgcccgtgctcggcagaagttttac
gcggacaagacccgcgtggacctcaggttcaacgaaggtgaccttgttatgctccgaact
gaaggataa
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