Chondrus crispus (carragheen): CHC_T00008862001
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Entry
CHC_T00008862001 CDS
T02916
Name
(RefSeq) WD40-repeat containing protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
NB-ARC
AAA_22
Motif
Other DBs
NCBI-GeneID:
17320607
NCBI-ProteinID:
XP_005712891
UniProt:
R7Q5I1
LinkDB
All DBs
AA seq
1290 aa
AA seq
DB search
MADPYSILGLTGPVEQIVRLIASLIERHKAYKENKTLCTEMLAAYTTLQADITALKDMPI
QGTSSHTGLLQREVADISSFIWKSLAELQKESDDPKARLGPFTSAVGDRKVLGKRKHPKG
RLRTFACAMRDSEVLEKRKEEACHLHDRIIQASTGIDVRATRAAVESIRRGTGDVFRASI
RAERNPASIYVKLDSQGSDGLPNTCESRLKAAVLRRDNNEQVGATAVGQGGVGKTCALRA
IAHDDKIKAEFSGGVYFMSLGKDGNVGRLIDELCVIVETSGGIQTAAEMREQSEFERVLA
RVHAWFYSHVCLFIVDDVWVVNDIDANILQKLSVLTGTAGGSGERTSRLLYSTRDRELRQ
IGEQVSFEPRETEGKEAVDMLVHASIGEANREEVDDARCKEAVSEILEMCGGLPLALNVA
GTSVRYMRERWEGEVSEAWGEYVSRMKRRNTIRGESPRDGYSSLDGTLHTSLDILECNVG
SSGETVGDFSFRKMHRSLCVMKKQDRIPLSLVGDLWELDEDWTEWCAKQMERVGLVELQY
EKGCGRLRVHDLTHDFAVEEAKKKEGVEKWCKNMTDVCRAGGGLLAMSEGRDGEGKSARE
EYVFENIYRVLKQGGCIEELKRLFLSGRWVKTVIRRGGVWQYEEAVKGLSRDLKRKRGSG
MVGMGRVDEDAVDTMVLMMRAARLSVPFCGESSAGIYFQLYGRVKHKARDSGCVRKILEE
IKRYAPRPWVLPVSECVTRADGRLVEQIVLPCDSCRDIQVGIGSRGEVYGCQVGDSSRGE
VTVFTQSAEKETKMVRLEGEFETESQSPGDVEARSVTSEVTGEKRSVTRAACASFYKRKG
YVVVGYEDGTLRLWSTSERKVLRSFRGHRSRVVCVAMSGDGRRVVSGSWDNSVRVWDVET
GSQVGDALVGHKGPVVVVAFSGDGRRVVSGSWDWSVRVWDVETGAQVGDALVGHTDTVYS
VAMSGDGRRVVSGSYDKSVRVWDVETGAQVGDALVGHTDSVESVAMSGDGRRVVSGSEDK
SVRVWDVETGAQVGDALVGHTDAVWSVAMSEDGRRTISGSQDKSVRVWDVETGAQVGDAL
VGHTGSVWSVAMSGDGRRVVSGSWDSDVRVWDVETGAQVGDALVGHTNSVKSVAMSGDGR
RVVSGSRDNSVRVWDVETGAHVGDALVGHTDSVESVAMSGDGRRVVSGSEDKSVRVWDVE
SGITLHTGRVEDWQEITSRFLRTGDLRAASLAGRTSQIFSRDGGVVQRREDGSEAVLAQL
DNPKDLQIDHDHGVVVAGVGHLVAIMKLVV
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggctgatccgtacagcatcttgggcctcaccggcccggttgagcaaatcgtccgcctc
atcgcaagtctcatcgaacgacacaaagcctacaaggaaaacaaaacgctctgtaccgaa
atgctcgccgcctacaccaccttgcaggcagacatcacggcactgaaagacatgccgatc
caaggaacgtcgtcgcacacaggcttgctccaacgtgaagtcgcggacatctcgagcttc
atatggaagtccctcgctgagctgcagaaagagtcggacgacccaaaagcgagactcggt
ccgttcacctctgcagtgggagatagaaaagtactagggaagcgcaagcacccaaaaggg
agactccgtacgttcgcctgtgcaatgagagatagcgaagttctagagaagcgcaaggaa
gaagcgtgccaccttcacgatcgtattatccaagcaagcacgggcatcgatgttcgcgcg
actcgcgcagccgtcgaatcgatcagacgaggcacgggtgatgtgttcagggcgtcaata
agagccgaacgtaatcctgcgtcgatatatgtgaagcttgattctcaagggagcgatgga
ttgccgaacacgtgtgagtcgcgtctaaaagcggctgtgctacggagagataataacgag
caagtgggtgcgacagcagtgggacagggcggagtcgggaagacgtgtgccctacgagcg
atcgcgcacgacgataagattaaggcggagttttcgggaggagtgtacttcatgtcgctg
gggaaagacggaaacgtgggacgtctgattgacgaactttgtgtgattgtggaaacgtcc
ggcggcatccagacggctgcggaaatgcgagagcagagcgagtttgaaagggtgttagcg
agggtacacgcgtggttttacagtcatgtgtgcctgttcatcgttgatgatgtgtgggtc
gtgaatgatatagacgcaaacatccttcaaaagttgtctgttctgactggcactgcgggg
ggcagcggggaaaggacgagcagactactgtactccacgagggatagggagctgcgtcag
attggggagcaggtttctttcgagccgagagagacggaagggaaagaagcagttgacatg
cttgtgcacgcgagtattggcgaggcgaatcgagaggaagtagatgatgcaagatgcaaa
gaggccgtgagtgaaatactggaaatgtgtggcggattgccgcttgccctgaacgtggca
ggaacgagtgtgaggtacatgagggaaagatgggagggagaagtgtcagaagcatggggg
gagtacgtttcgaggatgaagaggcgtaacacgattcgcggggagagtccgagggacgga
tattcgtcgttggatgggacattgcatacgtcactagatatcctggagtgcaatgtgggg
agcagtggggagacggttggtgatttttcgtttcgaaagatgcaccggagtctgtgcgtt
atgaagaagcaagaccggatacctttgagtttggttggagatttgtgggagctggacgag
gattggacggaatggtgtgcaaagcagatggaaagggttggattagtggaactgcaatat
gagaagggttgtggtaggttgcgggtgcatgatctgacgcacgatttcgcggtggaagaa
gcgaagaagaaggagggtgtagagaagtggtgcaagaatatgacagatgtatgcagggca
ggaggagggttgcttgcaatgagtgagggccgagacggagagggcaagagcgcacgggag
gagtatgttttcgagaacatataccgtgttctgaaacagggtgggtgtatagaggagctg
aagagactatttttgagtgggcgatgggtgaagacagtgatacggagaggcggggtttgg
cagtacgaggaagctgtgaaaggattgagtagagacttgaagcgaaaaagagggagcggg
atggtgggaatgggacgggtagatgaggatgcagtggatacaatggttttgatgatgcgg
gctgcgcgactgagtgtaccattttgtggtgaaagtagtgctgggatttactttcaactg
tatgggcgagtgaagcacaaggcacgggattcaggttgtgtgcgaaagatcttggaagaa
atcaagagatacgcaccacggccgtgggtgctgcctgtgagtgagtgtgtcacgcgagcc
gatggaaggttggtagagcagattgtcctcccgtgtgacagttgcagagacattcaagtc
ggcataggttccaggggtgaagtgtatggatgtcaggtgggggactcgtccaggggagaa
gtaacagttttcacacaatctgctgagaaggagacgaagatggttcgattagaaggcgag
ttcgaaacggagagccagagcccaggggacgttgaagcaagaagtgtaacttccgaagtg
actggagaaaaacggagcgtgacgagagctgcctgcgcttctttctataagaggaagggg
tatgttgttgtgggatatgaagacgggacgttaaggttgtggagtacgtcggagaggaaa
gtattgagaagtttccgcggtcacaggtcgcgagtggtttgcgttgcgatgagtggggac
ggaagacgtgtggtatctggatcgtgggacaatagcgtgcgggtgtgggacgtggagaca
ggatcacaagttggggacgcgttagttggacacaagggtccagtggttgtcgttgcgttt
agtggggacggaagacgtgtggtatctggatcgtgggactggagcgtgcgagtgtgggac
gtagagaccggagcacaagtcggggacgcgttagttggacacacggatactgtgtatagc
gttgcgatgagtggggacggaagacgcgtggtgtctggatcgtatgacaaaagcgtgcgg
gtgtgggacgtggagacgggagcacaagtcggggatgcgttagttggacacaccgattcg
gtggagagcgttgcgatgagtggggacggaagacgtgtggtatctggatcggaggacaag
agcgtgcgggtgtgggacgtggagacaggagcacaagttggggacgcgttagttggacac
accgatgcggtgtggagcgttgcgatgagtgaggatggaagacgtacgatatctggatct
caggacaagagcgtgcgggtgtgggacgtggagacaggagcacaagttggggacgcgtta
gttggacacacgggttcggtgtggagcgttgcgatgagtggggacggaagacgtgtggta
tctggatcgtgggacagcgacgtgcgggtgtgggacgtggagacgggagcacaagtcggg
gacgcgttagttggacacacgaattcggtgaagagcgttgcgatgagtggggacgggaga
cgtgtggtatctggatcccgggacaatagcgtgcgggtgtgggacgtggagacaggagca
catgtcggggacgcgttagttggacacaccgattcggtggagagcgttgcgatgagtggg
gacggaagacgtgtggtatctggatcggaggacaagagcgtgcgggtgtgggacgtggag
agtgggatcacacttcataccgggagagtagaggattggcaagaaatcacgagtcggttc
ctgaggacgggagacttgcgtgctgcttctctcgcaggacgaacatcacaaatattttca
agggacggaggagttgtgcagaggcgagaggatgggtctgaggctgtgttggcccagttg
gacaatccgaaagacttgcagatagatcatgatcacggggtcgtagttgcaggggtgggc
catctggttgctatcatgaagctagtggtctaa
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