KEGG   Chondrus crispus (carragheen): CHC_T00009243001
Entry
CHC_T00009243001  CDS       T02916                                 
Name
(RefSeq) ATP-dependent Zn protease FtsH2
  KO
K08956  AFG3 family protein [EC:3.4.24.-]
Organism
ccp  Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ccp01002]
    CHC_T00009243001
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ccp03110]
    CHC_T00009243001
Peptidases and inhibitors [BR:ccp01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   CHC_T00009243001
Chaperones and folding catalysts [BR:ccp03110]
 Other chaperones and cochaperones
  AAA proteases
   CHC_T00009243001
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 FtsH_ext AAA_5 AAA_22 AAA_16 TIP49 RuvB_N AAA_17 AAA_14 IstB_IS21 Mg_chelatase AAA_33
Other DBs
NCBI-GeneID: 17320683
NCBI-ProteinID: XP_005712975
UniProt: R7Q3R0
LinkDB
AA seq 888 aa
MTEDHPRKPTASKGKTGPGAENGDPKGPEAKADNVAGGGGGGNKEGGKTDGPGKPGKPQS
DDDQSNSWMGQAALALFVMLGLSLLGSRDHGREISFQAFVWDLLEPGLVDRIEVVNRNVA
RVYLRTSARARPQDAAFETRRGQRGSMATINSTESPFYFNIGTIDTFERKLEAVQEDLGI
EPDDLVPVVYTKESSLTTELLRQAPSIILLGIGILVLRNALGQLGGMGGGRSGIFQVGKA
NPTVVKGGEAGVQTTTFSQVAGLDEAKLEVMEFVDFLKNPARYEKLGAKIPKGALLVGPP
GTGKTLLARATAGEANVPFFSMSGSDFIEMFVGVGPSRVRDLFTQARASAPCIIFIDEID
AIGKARGRSGISGGNDERENTLNALLVEMDGFSSSAGVVVLAGTNRADVLDKALLRPGRF
DRQISIDKPDMRGRYQIFMVHLQPLKLKDEASKIAKRLAALSPGFAGADIANICNEAALI
AARQDKNFIEMIDFEKAIDRVIGGLEKKNKVISRKEREIVAHHEAGHAVAGWFLKHADPL
IKVSIIPRGSAALGFAQYLPVDKFLQSREQMKDFMIMALGGRVAEQLCFGSITTGAQDDL
KRITRAVYAQITTFGMSEKVGKIYFPKAGESGNQFYKPYSEKTAELIDDEALRIVEEAYL
DCEKLLTEKLDVVKNLATRLLDKEVIGEEDLIDVLGPRPFAKPATYDELVGRYEQDRKKR
TGKGGENDDPSARDPSTTPPIPVEGAPAGAPTGQGFKRRGHTRPTPDEEAIPELAAIVAH
FVFSSTRWKMPPAPLQWSPFLPRYFAYLSMVAIASIWQSDIFYPSDKSDYSSHCQDKKSR
TESCSKKDFIDLCFLAITDEPVHRHIGLYCQQRHSPKCCCSNIGSKAK
NT seq 2667 nt   +upstreamnt  +downstreamnt
atgactgaggaccatccgagaaaacccaccgccagcaaagggaaaacgggccccggtgcg
gaaaacggcgaccccaaggggcctgaagcgaaagccgacaacgttgcgggtggtgggggc
ggcgggaacaaggagggcggcaagacagacggccccggcaagcccggcaagccgcaaagc
gacgacgatcagagcaattcatggatgggccaggccgcgctggcactcttcgtcatgctg
ggtttgtcgctgctcggctcgcgcgaccacggccgggagatttccttccaggcattcgtg
tgggacttgctggaaccggggctcgtcgaccgcatcgaggtcgtcaatcgcaacgtagcc
cgcgtgtacctgcgcacgtccgcgcgcgcgcggccgcaggatgccgccttcgagaccagg
agggggcagaggggcagcatggctacaatcaactcgaccgagtcgccattctatttcaat
atcggcactattgatacgtttgagcgcaagctggaagcagtgcaggaagatcttggtatt
gagccggatgacttggtgccggttgtgtatacgaaagaatcgagtttgacgacggagctg
ttgagacaagccccttcgatcatactgttggggattggtattctcgtcttgagaaacgcc
ttgggacagcttggaggcatgggaggggggcgtagcgggatctttcaagtgggcaaagcc
aacccgacggtcgtcaagggtggcgaagccggggtgcagaccacgacgttctcgcaagtt
gcgggcttggacgaggccaagttggaggtcatggagtttgtcgacttcctgaagaaccca
gcacgatatgagaaactcggtgcgaagatcccgaaaggggcgctcttggtaggaccccca
gggacgggaaagaccctactggcaagggcgacagccggcgaagcgaatgtccctttcttt
tcgatgagtgggtccgacttcatcgaaatgtttgtcggtgtgggaccgagtcgcgtgcgc
gatttgttcacacaggcaagggccagcgcgccttgtatcatcttcattgatgaaattgat
gccattggaaaggcgagggggaggagcgggatttctgggggtaatgatgaacgagagaac
accttgaatgccctcttggttgaaatggacggattctcatcaagcgctggcgtggtcgtc
ttggcaggtacgaatagagctgatgtcttggacaaggctctccttcgtccaggccgtttc
gatcgtcaaatcagtattgacaaaccggacatgcggggcaggtatcaaattttcatggtt
catctgcaaccactgaagctaaaggatgaagcatcaaagattgcgaagcgactggcagct
ttgtctccgggcttcgctggagctgacattgcaaacatttgtaacgaagctgcccttatc
gccgcccgccaggacaaaaactttatcgaaatgatcgactttgaaaaggccatagaccga
gtcattggaggtcttgaaaagaagaacaaggtcatttctcggaaagagagagagattgta
gctcaccatgaggcaggccatgccgttgctgggtggttcttaaaacatgctgacccgtta
attaaggtttccatcatccccaggggttctgcagctcttggttttgcgcagtatctacct
gtggacaaattcctacagtctagggagcaaatgaaagacttcatgataatggctctcgga
ggtcgcgtcgcggaacaattatgtttcggcagcataactacaggtgcgcaagatgatttg
aagcggattacccgtgccgtgtatgcacagattaccacttttgggatgagtgagaaggtt
gggaagatctactttcccaaggcaggcgaatcagggaatcaattttacaagccgtacagc
gaaaagacagcagagctgatcgacgatgaggctttacggattgttgaagaagcgtatcta
gactgtgaaaagctactaactgaaaaactggacgtcgtgaaaaatctcgcaacccgactg
ctcgacaaggaagtcattggtgaagaggatttgatcgacgtgctcggccctaggccattc
gcgaagccagcgacatacgacgaattggtagggcggtacgagcaagataggaaaaagcgg
actgggaagggaggtgaaaacgatgatccgagcgccagggacccgtctactactccacca
attcccgttgagggagcgccggcaggagccccgactggccaaggtttcaagcggaggggt
catactagaccaacacccgacgaagaagcaataccagagctagcggctatagtagctcat
ttcgtattctcctcaacaaggtggaagatgccccccgccccacttcaatggagtccattc
cttccgcggtatttcgcttacctctccatggttgcaatcgcctcgatttggcagagcgat
atattttatccatccgacaaaagcgactattccagtcactgccaagataagaagagcagg
accgagagttgcagcaagaaggacttcattgacctctgtttccttgcgatcactgatgaa
cctgtccacagacacatcggtctttactgtcagcagcgtcattccccaaagtgttgctgc
agtaatatcggctcgaaagccaagtaa

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