Chondrus crispus (carragheen): CHC_T00009564001
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Entry
CHC_T00009564001 CDS
T02916
Name
(RefSeq) Peptide chain release factor eRF3, (GTP-binding subunit)
KO
K03267
peptide chain release factor subunit 3
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CHC_T00009564001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccp03019
]
CHC_T00009564001
03012 Translation factors [BR:
ccp03012
]
CHC_T00009564001
Messenger RNA biogenesis [BR:
ccp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CHC_T00009564001
Translation factors [BR:
ccp03012
]
Eukaryotic type
Release factors
CHC_T00009564001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
RNase_II_C_S1
G-alpha
Motif
Other DBs
NCBI-GeneID:
17319927
NCBI-ProteinID:
XP_005712186
UniProt:
R7Q591
LinkDB
All DBs
AA seq
536 aa
AA seq
DB search
MNPQASEFVPSWLAQPADEPKPQVNDKPQGSWEDDPTDSPPTEALAKAAISEVKSEHTAA
ASEAPPAKAEPTRPKAPVENTSQNEVDLGAFDLDQKKPLNVVLLGHVDAGKSTISGHILV
LTGNVDERTMEKYEKEAKALGRESWKFAFALDTSEQERAKGKTEECGQASFTTETRRFTI
LDAPGHKNYVPHMIGGASQADIGILVISARKGEFETGFERGGQTREHAMLAKTSGVRQMV
VVVNKLDDTSVLNPDGSWSEERFLECKTKLEPYLKQVGWNSKGLVWIPVSGITGQNLKDK
VPSSTCSWYDGEPLLDVLENLRPPERLLSGPVKMPISEKHKEMGTMVMGKLESGVIKVND
RLVMMPNRVEVLIDSLQLEGSTAQAAEPGDVVRLRLKGIEEEDVRVGFVLCSSTDLVSYT
HSFIARLMVLEHKSIICAGYSAVIHIHSAVEEFTVSKLLAELDKKGKAKQKNPKFVKPGM
RCLVQLKMSQPICVEPYDVFPQLGRFMIRDEGKTVAVGTVARLISDSDRPDGSNRD
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaatccccaagcgagcgagtttgttccctcatggctcgcgcagccggccgacgagccg
aaaccacaagtcaacgacaagccgcagggatcttgggaggacgaccccacggattccccg
cccacggaagccctcgcaaaagccgccatctccgaggtcaagtcggaacacaccgccgca
gcatcggaagccccacccgcgaaagctgagcccacaaggcccaaggctcccgtggaaaac
acatcccagaacgaggtggatctgggggcctttgatttggatcagaagaagccgctgaac
gtcgtgctgctcgggcatgtcgacgcggggaagagcactatatcggggcatattctcgtg
ctcacgggcaatgtggacgagcgtacgatggagaagtacgagaaggaggccaaggcatta
ggacgagagagctggaagtttgccttcgcactcgacacgtcggagcaggagagggcgaaa
ggaaagactgaggagtgcggacaggctagctttacaacggagacgaggcgctttaccata
ctagatgcacccggtcataagaactacgtgccgcatatgatcggtggggcgagccaggcg
gatatcggcattctcgtgatttcagcgaggaagggcgagtttgagacaggattcgaaaga
ggggggcaaacaagagagcatgcgatgctggcaaagacttcgggcgttaggcagatggtt
gttgtagtgaacaagttggatgacacgagcgtgctcaaccccgatggttcgtggagcgag
gagaggtttttagagtgcaagacgaagctggagccatacttgaagcaagtcgggtggaac
tcgaagggcttggtttggatcccggtgtctggcataacgggccagaatttgaaggataag
gttccaagttcgacgtgttcatggtatgatggagaaccgcttttggatgtactggagaac
ctacgtccgccggagagattgctatcggggccagtcaagatgccgatttcggagaaacac
aaggagatgggaacaatggtaatgggtaagctcgagtccggagtcattaaggttaacgac
aggctcgttatgatgccgaatcgtgttgaagtgctcatagattcgctccagctcgagggt
tcgaccgcgcaagcggcggagccaggggatgttgttcgcctccggttaaagggtattgaa
gaggaggatgtccgggtcgggtttgttttgtgctcatcaacggaccttgtttcttacaca
cactcttttattgcacgattgatggtgttagagcataagagtatcatctgcgcaggatac
tccgccgtgattcatattcattctgctgttgaggagttcaccgtgtctaagctgttggct
gagttggacaaaaagggtaaggcaaagcaaaagaatcccaaatttgtcaagcccggcatg
aggtgcttagtacagttgaagatgtcgcagcccatctgcgtcgagccgtacgatgtattc
ccacaactcggacgatttatgatccgtgacgagggcaaaacagttgccgtgggtacagta
gcgaggttgatatctgattccgacagaccagacgggtcgaacagagattaa
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