Chondrus crispus (carragheen): CHC_T00010323001
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Entry
CHC_T00010323001 CDS
T02916
Name
(RefSeq) transformer-SR ribonucleoprotein, putative
KO
K12897
transformer-2 protein
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHC_T00010323001
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccp01009
]
CHC_T00010323001
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccp03041
]
CHC_T00010323001
Protein phosphatases and associated proteins [BR:
ccp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CHC_T00010323001
Spliceosome [BR:
ccp03041
]
Common components
Common spliceosomal components
SR proteins
CHC_T00010323001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SNN_linker
Motif
Other DBs
NCBI-GeneID:
17320294
NCBI-ProteinID:
XP_005712561
UniProt:
R7Q5L8
LinkDB
All DBs
AA seq
348 aa
AA seq
DB search
MSSPKDDRDVMEDRESRSDQKEERKETRGAETQYDGDAEETDRVEHEHKPSLGDEDERRE
SGKEAGEDRETGPSTEKQNADEERGVGRGEVKEPRDEARGEDHEGRREGGEERRDAEKAD
GEEVRGKERERNGGSGPSDEQGGSELVNLFVRNVAKHVIEEQLVVLFSKFGKVDSAVVVR
DPHSRECRGFGFVKMLHEEEAAQAIEALRDFEFEGRRIAVEKAKRKAPHSRTPGEYMGID
RRIRDRYSGMKRSRDYGGYEHGDPYGMDRRGGYGGRRHESDGRGRYDDRGWDPRGYRPQP
MRPSYDGREQKRGRYEGGGGYGSRADAGEQRFREREAPVPREPADDFV
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaccaaaggacgacagagatgtcatggaggatcgtgagtctcgttcagaccag
aaggaggaacgaaaggaaacccgcggtgccgagacacaatatgacggcgacgcagaggag
accgaccgtgtggagcacgagcacaaaccttcactgggggatgaggatgagaggcgggaa
agcggcaaggaagctggtgaagatcgtgagactgggccgtcaacggagaagcaaaatgcg
gatgaagagagaggagtggggcggggagaggtgaaggagccgcgggatgaggcgagaggt
gaggaccatgagggacgtcgcgaaggtggggaggagcggagggatgctgagaaagctgac
ggggaagaagtacgtggcaaagaaagagaaaggaacggcggctcagggccatccgatgag
caaggtggtagtgaacttgtgaatttgtttgtgagaaacgtggcaaagcatgtgattgag
gaacaattggtggttctgttcagtaagtttggaaaagtggactctgcggtggtggtccgt
gacccgcattcgagagaatgccgggggtttgggtttgtgaaaatgcttcacgaggaggag
gctgcgcaagcgatcgaagcgctgcgagattttgaatttgaggggcgtcgaatagctgtt
gagaaggcgaagcggaaggcaccgcattcgcggaccccgggtgagtacatgggaattgac
cggcgcatcagggaccgatactctgggatgaagaggtcgagggactacggcgggtatgag
cacggcgacccgtatggaatggacagacgcggcgggtatggggggagaagacacgaaagt
gatggacggggacggtacgacgaccggggatgggaccccaggggttacaggccgcaaccg
atgagaccatcgtatgatggacgtgagcaaaagcgggggaggtacgagggtggtggcgga
tatggctctagggcggatgcaggggagcagcggttcagggagagggaggcaccagtgccc
cgagagcccgctgatgattttgtatga
DBGET
integrated database retrieval system
