Colias croceus (clouded yellow): 123700174
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Entry
123700174 CDS
T08651
Name
(RefSeq) putative ATP-dependent RNA helicase Pl10 isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ccrc
Colias croceus (clouded yellow)
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrc03019
]
123700174
03041 Spliceosome [BR:
ccrc03041
]
123700174
03036 Chromosome and associated proteins [BR:
ccrc03036
]
123700174
Enzymes [BR:
ccrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123700174
Messenger RNA biogenesis [BR:
ccrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123700174
mRNA cycle factors
Common to processing body (P body) and stress granule
123700174
Spliceosome [BR:
ccrc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123700174
Chromosome and associated proteins [BR:
ccrc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123700174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
123700174
NCBI-ProteinID:
XP_045503271
EnsemblRapid:
ENSCEUG00000003545
LinkDB
All DBs
Position
2:7444092..7455949
Genome browser
AA seq
735 aa
AA seq
DB search
MSNVTNQNGTGLEQQLAGLDLQPQATKSAGRYIPPHLRRQLEAKPAEGEGSKRQSLDSNE
GRDTRSSYGGNSRTYDRGGRRDDRDRDRDRENDRGYDQRYPRSNRGREAGSQNGDSDRWE
SERWSDRGRGGGAGGARESRDIRETRDVREPRGESRDIRRDEDYTEPPQPRNDRWKEPEP
RAEERSNSRWPSDDVRRTSSRRDENDWTVPLPRDERQELELFGTGNTGINFSKYEDIPVE
ASGENVPDFITSFEDVNLTEIMRANIASARYDKPTPVQKYAIPIVLGRRDVMACAQTGSG
KTAAFLVPILNQMYEAGPKNVGTFQRRKQYPLGLVLAPTRELATQIYDEARKFAYRSRVR
PCVVYGGSPIHEQFRELERGCHLLVATPGRLVDMLARGRVALDHCRHLVLDEADRMLDMG
FEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQVLAQDFLYNYVFLAVGRVGSTSENIT
QKVVWVEEQDKRSFLLDLLNASNLLQRSRTEEDQLTLVFVETKKGADQLEEFLDRDGYPV
TSIHGDRSQREREEALRRFRSGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHR
IGRTGRMGNLGVATSFFNDSNRGLARDLVELLVEAKQDVPNWLTSTAADGRAGGGGRRAG
SRSGGGTRFGGSGFGARDFRTQSRTQPRSAGPSAMGNGFGYGGGSYGGNYGGSYGGGGGG
GGGGGTDWWENCNEP
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgttaccaaccaaaatggaacaggtctagagcagcagcttgctggtctggac
ttgcagcctcaggctactaaaagtgctggccgctacatccctccgcatctgcgtaggcaa
ttggaggctaaacctgctgaaggcgaagggtctaagcgtcaaagcttagacagcaacgag
ggacgggacacccgttcatcatacggaggcaactctagaacgtacgaccgtggtggtcgg
cgcgacgaccgcgaccgtgaccgcgaccgtgaaaacgatcgcggctacgatcagcgatac
ccgcgcagtaaccgcggtcgtgaagcaggaagtcagaatggcgattcagatcgctgggag
tcagagcgctggtcggaccgcgggcgcggcggcggcgcgggcggagcgcgcgagtcgcgc
gacattcgcgagacgcgcgacgtgcgcgagccgcgcggcgagtcgcgcgacatccgccgc
gacgaggactacaccgagccgccgcagccgcggaacgaccggtggaaggagccggagccc
cgcgcggaggagcgatccaactcccgctggccgtcggacgacgtgcgccgcacctcgtcg
cgcagggacgagaatgattggacagtcccgctacctcgcgacgagcggcaggagttggag
ctctttggcactggcaacacaggaatcaatttctccaaatacgaggatataccggttgag
gccagcggcgagaacgtaccggacttcattacaagctttgaggatgttaacctgacagaa
ataatgcgggcgaacatcgccagcgcgcgctatgacaagccgacgccggtgcagaagtac
gcgatcccgatagtgctcggccgccgcgacgtgatggcgtgcgcgcagaccggctccggc
aagacggccgccttcctcgtgcccatactcaaccagatgtatgaggctgggcccaaaaac
gtggggacattccagcgacgcaagcaatacccgctggggctcgtgttggcgccaacgcgc
gagctcgccacacagatttatgatgaagccagaaaattcgcctaccgctcgcgtgtccga
ccctgtgtagtatacggcggctccccgatccacgagcagttccgcgagctggagcgcggc
tgccacctactggtggcgacgcccgggcggctggtggacatgctggcgcgcggccgcgtg
gcgctcgaccactgccgccatctcgtgctcgacgaggcggaccgcatgctggacatgggc
ttcgagccgcagatccgcaagatcgtcgagtgccacactatgcccaagaccggcgagcgg
cagacgctcatgttctccgccaccttccccaagcagattcaagtgctcgcacaggacttc
ttatacaattacgtgttcctcgctgtcggacgggttggctccacgtctgagaatattacg
cagaaggttgtatgggtagaggaacaggacaagcgatcatttttgttggatttattgaat
gcctccaatttgttgcaacgttcgcgcaccgaggaagatcaactcactctggtcttcgtc
gagacaaagaaaggtgcggaccagctggaggagttcctggaccgcgacgggtacccggtg
acatctatccacggggaccggtcgcagcgtgagcgagaggaggccctgcgccgcttcaga
tctggccagacgccgatattggtggccactgctgtcgccgctagaggtctggacattccg
cacgtgcggcacgtgatcaacttcgacctgccgtccgacgtggaggagtatgtgcatcgc
atcgggcgtaccggccgtatgggcaacctcggtgtagccacgtcgttcttcaacgactcc
aaccgcggcctggcgcgggacctggtcgagctgctggtggaggctaagcaggatgtgcca
aattggttgacgagcacggcagctgacggtcgcgctggcggcggcgggcggcgcgcgggc
agccgctcgggcggcggcactcgcttcggcggcagcggcttcggggcgcgcgacttccgt
acgcagtcgcgcacgcagccgcgctccgccggaccgtccgctatgggcaatggtttcggc
tacggcggcggttcgtacggcggcaactacggcggttcgtacggcggcggtggcggcggt
ggcggtggcggtggcaccgactggtgggagaactgcaatgaaccctag
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