Cariama cristata (Red-legged seriema): 104157333
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Entry
104157333 CDS
T08341
Symbol
COL4A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri04510
Focal adhesion
ccri04512
ECM-receptor interaction
ccri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104157333 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104157333 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104157333 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccri04147
]
104157333 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
ccri00536
]
104157333 (COL4A2)
Exosome [BR:
ccri04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104157333 (COL4A2)
Glycosaminoglycan binding proteins [BR:
ccri00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104157333 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104157333
NCBI-ProteinID:
XP_009692931
LinkDB
All DBs
Position
Unknown
AA seq
1051 aa
AA seq
DB search
CGQVTEDFSRGDGTEPIWSGAGCVRPPKGSQGKPGVPGATGAKGARGFPGDPGPVGYPGL
NGTRGDPGREGFPGPPGFTGPRGDGGPNGLPGLQGHPGLTGKPGTPGAAGLKGFPGDVLG
AAAGSRGDVGLPGFPGLKGLPGDQGVPGARGADGNPGLPGPKGDPGPQGLPGLMGLPGIP
GTRGFPGLPGNPGPDGRPGPQGPVGPPGARGEDGEQGFPGPVGLKGLSGDKGETGYPGLQ
GVPGVTGPPGISGMDGFPGDKGSRGSPGIDGFKGMTGLKGRSGIKGIKGEFGPFGARGDK
GAEGARGIKGDRGDQGPPGEPPKLKPSMMMEVKGEKGDVGERGTKGFFGLKGSKGMPGIP
GKTGIPGSPGHPSYVAGTKGDIGAKGLTGLKGYPGPAGSPGIRGFPGSTGGRGEKGIPGI
SGHFGTPGSHGEIGEQGDTVNLPGMPGLKGEVGVPGLTGTRGGTGQKGESGDPGFPGIEG
LKGTQGVPGSVGLKGLPGLVGPPGQQGSPGTPGFQGEKGTPGWPGLPGQAGFPGLRGISG
LHGLPGTKGLPGSPGPDGYGSAGFPGAVGDKGEAGEPSRVEGTRGPPGQKGDRGVPGVQG
PFGIXXXXXPPGISNISGYPGDKGSPGLDGVPGYPGLQGQPGIPAPPGSKGESGQTGVSG
QIGPKGSRGDPGLAGTPGIPGYPGPKGRKGEQGVIGFMGTVGFPGDLGPIGPKGDRGVTG
FQGPPGSPGLPPLPPRLVAEQGSPGLPGNTGPQGSPGDMGPQGPPGDPGFRGAPGEPGLQ
GRGGITAPPGPRGEQGATGFQGPVGFEGQPGRPGSPGLPGMPGRSVSMGYLLVKHSQSDQ
EPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYANR
NDKSYWLSTTAPLPMMPVAEDDIRPYISRCSVCEAPAVAIAVHSQEASIPHCPEGWRSLW
IGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTID
QPFQSKPSADTLKAGLIRSHISRCQVCMKNL
NT seq
3158 nt
NT seq
+upstream
nt +downstream
nt
actgtgggcaggtcactgaagacttttctagaggagatggaaccgagccaatatggtcag
gcgcaggctgcgtgaggccaccaaagggatcccagggcaagccgggagtgccaggagcca
caggtgcaaaaggtgcaagaggattcccaggtgatccaggtccagtgggatacccagggc
taaatggtacacgaggtgatccaggtcgggagggattcccaggtcctccaggttttactg
ggcccaggggagacggggggccgaacggtctacctggactgcagggacacccaggcctta
caggaaaacctggcaccccgggagcggcaggactgaagggctttcctggtgacgtcttgg
gagcagcagcaggttcccgaggggatgtcgggctccccggcttcccagggttgaaaggct
tgccaggagatcaaggagtaccaggagctagaggagcagatggtaatccaggtttgccag
gacccaaaggagatccagggccacaaggtctccctggtttgatgggattgccaggaatac
caggaacgcgtggattcccagggctaccaggaaaccctgggccagatggcaggcctggcc
ctcaaggacctgttggtccacctggtgctaggggagaagatggtgagcaaggttttcctg
gccctgtgggcctgaaaggtctgtccggtgacaaaggtgaaacaggctacccgggattac
aaggtgtgcctggcgtgactggtccccctggcataagtggaatggatggctttccaggag
ataaaggctcaagaggttcacctggcattgacggtttcaaaggcatgacaggcctaaagg
gaagatcaggcatcaagggaatcaaaggagaatttgggccattcggggctcggggtgata
aaggcgcagagggtgcacgcggcattaaaggtgaccgtggggatcaaggccccccaggag
aacccccaaaactcaagcccagcatgatgatggaagttaaaggtgaaaaaggagatgttg
gagaaaggggcacgaagggattctttggcttaaaaggtagcaagggaatgccaggcattc
ccggaaagacaggaattccagggtcccctgggcatcccagctacgtggctggtacgaaag
gggacatcggtgcgaaagggctgacaggtctgaaggggtatcctggcccagccggctctc
ctggcatcagaggcttccctggcagcacaggaggcaggggagaaaagggtattccaggaa
tttcaggccattttggtactcctggctcacatggtgaaataggtgagcagggagatactg
taaacttgcccggaatgccaggccttaaaggggaagttggtgtaccaggcttaacaggca
caagaggaggcacaggacaaaaaggcgaaagcggtgatcctggtttccctggcattgaag
gcctcaagggcacgcagggtgtccctggctctgtgggactgaaaggtttgccagggctgg
tcggccccccggggcagcaaggaagccctgggacacctgggtttcaaggtgaaaaaggaa
ctccgggctggcctggcttaccaggacaagcaggctttcctggcttaagaggaatcagcg
gactgcacggtttaccgggcaccaagggcttaccaggatcaccaggtccagatggctatg
gctctgcaggcttcccaggggcagtgggtgacaaaggggaggccggagagccgagcagag
tggaaggcacccgaggacctccgggtcagaagggagacagaggtgttccaggagtccaag
gaccctttggcattnnnnnnnnnnnnnnncctcctgggatttcaaatatatcaggatatc
ctggtgataaaggctccccaggtctcgacggggtgccaggctatccaggactacaggggc
agcctggaataccggctccaccaggaagcaaaggagaaagtggacaaacaggtgtgagtg
gacaaatcggccccaaaggaagcagaggtgatcctggattagcagggacacctggcattc
ccgggtaccctggaccaaaaggtcgtaaaggtgaacaaggtgtcatcggctttatgggca
cagtaggatttccaggtgatttaggacccatcggacccaaaggggatagaggagtaactg
gctttcagggccctccaggctctcctgggctgccccctcttcctccaaggctggttgctg
agcaaggttcaccaggtctccctggaaatacaggacctcaaggaagcccaggagatatgg
gacctcagggtccaccaggcgatccaggtttcagaggcgcacctggagagccgggactcc
agggcaggggtggcatcacagctcctcccggccccagaggtgaacaaggagcaacagggt
ttcagggtccagtgggatttgaaggtcagccaggccgccccggtagccccgggctgcccg
gcatgccgggtcgcagcgttagcatgggctacttgctggtgaagcacagccagtccgacc
aagagccgatgtgcccggttggcatgaacaaactctggagtggatacagcctactgtact
ttgaaggacaagagaaggcacacaaccaggatctagggctggccggctcatgtttggctc
gtttcagtactatgccattcctctactgtaaccctggggacgtttgttattatgcaaatc
gaaatgataaatcctactggctctcaactacagcacctcttccaatgatgcctgtggcag
aagacgacattaggccgtatatcagtcgctgctcagtttgtgaggccccagctgtggcaa
ttgctgtccatagccaagaagcttctattcctcactgccctgaaggctggcgcagtttgt
ggattggatattccttccttatgcacactgctgctggggatgaaggtggaggacagtccc
tggtttctcctgggagctgcctggaagatttcagagcgacgcctttcatcgaatgcaatg
gcgcacgcggaacctgtcactactttgcaaataaatacagcttctggctcaccaccatcg
accagcccttccaaagcaagccctcggctgatacactcaaggcaggactcatccgaagcc
acatcagcagatgtcaagtctgtatgaaaaatttatag
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integrated database retrieval system
