Cariama cristata (Red-legged seriema): 104168736
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Entry
104168736 CDS
T08341
Symbol
BARD1
Name
(RefSeq) LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104168736 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccri03019
]
104168736 (BARD1)
04121 Ubiquitin system [BR:
ccri04121
]
104168736 (BARD1)
03036 Chromosome and associated proteins [BR:
ccri03036
]
104168736 (BARD1)
03400 DNA repair and recombination proteins [BR:
ccri03400
]
104168736 (BARD1)
Messenger RNA biogenesis [BR:
ccri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104168736 (BARD1)
Ubiquitin system [BR:
ccri04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
104168736 (BARD1)
Chromosome and associated proteins [BR:
ccri03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104168736 (BARD1)
DNA repair and recombination proteins [BR:
ccri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104168736 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
NIBRIN_BRCT_II
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
104168736
NCBI-ProteinID:
XP_009707725
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
STEVTATPTDSDFRKKNKKEQIKMWFSPRSRKIRCVLNKNQPETKNNDLCQDRSSIYDFF
PSPPHEKPSKPTKKPTQRQSKKTKKKRLADINKVWSLEKPEQKGGVEEKTSKEKCVTICS
QPVVLCSPEXXXXXXXXXXSRKETLQQESVKEADSNKNTENVEILPQVQSSEKKDNGEVA
CPTQVSKEKNCATETSPSIENEVTPLKRGREQSSLPVTSQSKRPRRSERSTIGQAGSQAD
CLEELPPSCSISPATEHKTPVQIASSVSKLTDTVMKTRSSAVFQEINSPSLSKSPSTPST
SKTCSPVGISQSPSLKSPGGNTIARRNYKGETLLHVASIKGDLAAVEQLLKNGADPNVKD
NAGWTPLHEACNHGHREVVELLLQYKALANTTGYQNDSPLHDAARNGHVNIVELLLLHGA
SRDAVNIFGRRPVDYAESEKMKSVLMLPVKNESFSFNRLSEALSPSQPRDGPLAILGSHL
SSQQQKLLNKLATFLKARRCTEFNSTVTHLVIPDVPMPSTVKCMMAVLTGCWVLKFEWVR
ACLQTRVREQEEKYEIQGGPQRGRLNREQLLPKLFDGCYFYFLGSFSHHQKSDLVELVKA
AGGQILVRQPKPDSDVTQTVNTVAYHAESTSDQRFCTQYVIYDVSSKFKPEKIRQGKVWM
APSSWLIDCVMSFQLLPVK
NT seq
2042 nt
NT seq
+upstream
nt +downstream
nt
attcaacagaagttacagccacgccaactgactcagactttagaaaaaagaataagaagg
aacaaataaaaatgtggttcagcccaagaagtaggaagattcgatgcgtcctgaacaaga
atcagcctgagactaaaaacaatgacctttgtcaagacagatcttcaatttatgatttct
ttccttcccctcctcatgaaaagccctccaagccaacaaaaaagccgacacagagacaga
gtaagaagacaaagaagaaacgtctagcagacattaacaaagtgtggagcttagaaaagc
ctgagcagaaaggaggagttgaggagaagacttccaaggaaaagtgtgtaaccatctgca
gtcaaccggtagtcctgtgctctccggaannnnnnnnnnnnnnnnnnnnnnnnnnnnnna
gccgtaaggagacactgcagcaggagtctgtaaaagaagccgactccaacaaaaatacag
aaaatgtggaaatattgccacaagtccaatcctcagagaagaaagataacggtgaggttg
cgtgtcctacacaagtcagcaaggaaaagaattgtgctacagagacgtcaccatcaatag
aaaatgaagttacgcctttaaaacgtggaagggagcaatccagtcttccagttacttctc
agtctaaaagaccaagaagaagtgagaggagcactattgggcaggcaggcagtcaggcag
attgcttagaggagttacctccgagttgctccatctccccagcgactgaacacaagacac
cagttcagattgcttcctccgtatcgaaactcactgacactgtaatgaagacaagaagct
ctgcagtctttcaagaaattaatagtccttcactttcaaaatctccctctaccccatcta
cttctaagacttgtagtccagtgggaatatcgcagagtccttctctgaagtcccctggtg
gtaacacaattgccagaagaaattacaaaggagagactttgctccatgttgcttccatca
agggtgacttagcagctgtggaacagctgctgaaaaatggggcagatcccaatgtcaaag
ataatgctggctggacaccactgcatgaggcatgtaatcatgggcacagagaagtggtgg
agctgttgctacaatacaaggcattagcgaatactacggggtatcagaacgactcgccgc
ttcatgatgctgccaggaatgggcatgtgaacattgttgagctgctgcttttgcatggtg
cctcccgtgatgcagttaatatatttggtcggcggcctgtggactatgcagaaagtgaaa
agatgaagtctgtgctaatgttaccagtgaagaatgaatcattttcatttaaccgactct
ctgaggcactgagccccagccagccaagagatggacctcttgctatactggggagccatc
ttagttcgcaacaacagaaattgctgaacaaactagcaacatttctgaaggctcgaaggt
gtactgaatttaacagcacagtaactcatcttgttatccctgatgttccaatgccaagta
ctgtcaaatgtatgatggctgttctgactggatgttgggtcctcaagtttgaatgggtac
gagcctgtctccaaaccagagttcgagaacaagaagagaaatatgaaatccaaggtggcc
cacaaagaggccggctcaacagagaacagctgctgcctaagttgtttgatggatgctact
tctattttttgggatctttcagccatcaccagaaaagtgatcttgtggagctggtcaaag
cagcaggaggacaaattctggttaggcagccaaaaccagacagtgatgtgacgcagacag
tcaacacggtggcataccatgcagaatctacttctgaccagagattttgcactcagtatg
taatctatgatgtgtcttctaaattcaagccggagaaaattcgtcagggcaaagtctgga
tggccccctccagctggcttatagactgtgtgatgtcatttcagctcctgcctgtaaagt
ga
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