Chondromyces crocatus: CMC5_007640
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Entry
CMC5_007640 CDS
T04010
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ccro
Chondromyces crocatus
Pathway
ccro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CMC5_007640 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccro03021
]
CMC5_007640 (rpoA)
03400 DNA repair and recombination proteins [BR:
ccro03400
]
CMC5_007640 (rpoA)
Enzymes [BR:
ccro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CMC5_007640 (rpoA)
Transcription machinery [BR:
ccro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CMC5_007640 (rpoA)
DNA repair and recombination proteins [BR:
ccro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CMC5_007640 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AKT36644
UniProt:
A0A0K1E722
LinkDB
All DBs
Position
970957..971991
Genome browser
AA seq
344 aa
AA seq
DB search
MSNSNMTMIARNWRDLIRPKGISVDTETTTAFYAKFTCEPLERGFGITIGNSLRRVLLSS
LQGAAATAIRIEGALHEFTSVPDVVEDVSDIILNVKEIVFKAAQPKTYSVRIDKEGPGPV
YARDIQLVDGLSVLNPDHLIAVLDKKGPLSMELTVNVGRGYVPADRNKTPTMPIGTIPID
ALFSPIRKVNYTVQNARVGQVTDYDKLTLEVWTNGSVAPSDAVAFAAKILKEQLSIWINF
EESEETSYQSTMTDEEPLNENLFRSVEELELSVRSANCLQNANITLIGELVQRTEQDMLK
TKNFGRKSLKEIKEILANMGLSLGMKIDNWPQLLERWKAQQAQA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattcaaatatgacgatgattgcacgcaactggcgtgatttgatccgtcccaag
ggaatctcagtcgatactgagacgacgaccgcattttacgccaagttcacctgcgagcct
ctggagcgcggattcggaataaccatcgggaactctctccggcgcgttcttctctcctcg
ctacaaggtgctgcggcgacggccattcgtattgagggtgcactgcacgagtttacctcg
gtgcctgatgtcgtcgaggacgtgagcgatatcattctcaacgtcaaagagattgttttc
aaggccgcccagcccaagacctatagcgttcggatcgacaaggaaggtcccgggcctgta
tacgctcgcgacattcaactggtcgatggtttgagcgtcctcaatcccgaccatctcatc
gccgttctcgataagaagggcccgctgtcgatggaactcacagtgaatgtgggccgcggc
tatgtgcctgctgatcggaacaagacgccgacgatgccgatcggaaccattccgatcgac
gctctcttctcccccatccgcaaggtcaactacaccgtccagaatgctcgtgtgggtcag
gtgactgattacgacaaactgaccctcgaggtgtggacgaatggttccgttgctccgtcc
gatgctgtcgcgttcgctgcgaagatcctcaaggagcagctttcgatctggatcaacttc
gaggagagtgaggagacgagctaccagtcgacgatgacagatgaggagcctctgaacgag
aatctcttccgatctgttgaggagctagagctcagtgtgcgatctgcaaattgtttgcag
aatgcaaacatcacactcatcggcgagctggtccagcggacagagcaagacatgctgaag
acgaagaactttggccgcaagtccttgaaagaaatcaaggagatcttggccaatatgggc
ttgtcgctaggcatgaagatcgataactggccgcagctcctggagcgctggaaggcgcag
caggcgcaggcttga
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