Chondromyces crocatus: CMC5_008840 Help Entry CMC5_008840       CDS       T04010                                  Symbol ligC Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism ccro  Chondromyces crocatus Pathway ccro03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:ccro00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     CMC5_008840 (ligC)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ccro03400]     CMC5_008840 (ligC) Enzymes [BR:ccro01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      CMC5_008840 (ligC) DNA repair and recombination proteins [BR:ccro03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      CMC5_008840 (ligC) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N Motif Other DBs NCBI-ProteinID:  AKT36763 UniProt:  A0A0K1E862 LinkDB All DBs Position 1140532..1142232 Genome browser AA seq 566 aa AA seqDB search MKLDEYRRKRDPERTNEPFPTPEQERRARKKTTVQKRGTHEGSFVVHLHDARRRHYDLRI EVGGVLASFAVPRGPSLDPKERRLAVRTEDHPLDYIDFEKVIPEGNYGAGPMILWDRGTV RYPNGSAEEGLGGGKLDLELAGTKLQGAFTLVRTGGRRGRGRAAKGTSDEDEKGARQWLL IKRSDEFAETDRDLTAEAPRSVLSGLTVEELEAGKAPPGSRSKPAARAGRSASASTKERA KTTRKPAKAEGEKPGRTAREAVRAAAKRHVPLSNPTKVLWPGEGISKRDLQAYYEAVGPL MLPYLRDRPVMLVRYPDGIEGKHFHQWSAPRGAPSWLRTARLETDQPSEAVDTILIDSVE SLLYVANLAAIEVHTLAARVSELGTCDFLTIDFDVKQSSLRAAVPLALELRQELEAAGLQ GFPKTSGKTGLHVLVPLGPGIPFETAKMLADLLGRLLVHHAPEAATMERFISRRGKRVFV DTGQTGQHRTLVAPYSPRAVPEGTVSMPLDWEEVTPALDPRAFTLETVPGRLEEVGDRLD GLLSARPDVPDAVARLERMARRKRAA NT seq 1701 nt NT seq  +upstreamnt  +downstreamnt atgaagctcgacgaataccggagaaaacgggacccagagcgcacgaacgagccattccca acgcccgagcaagagcgccgagcgcgcaagaagaccacggttcagaagcgcgggacccac gaggggtcgttcgtggtgcacctgcatgacgcacggcggcgtcattacgacctgcgcatc gaggtgggaggcgtgctggcgagttttgccgtgccccgcgggccgagcctggaccccaag gagcggcggttggcggtcaggaccgaggaccacccgctcgattacatcgatttcgagaag gtgatcccggaaggaaactacggcgcaggtccgatgatcctctgggatcgtggaacggtg cgctacccgaacgggtcggcggaagaggggctcgggggaggcaagctcgacctcgaactc gcgggcacgaagctccagggagcgttcaccctggtgcgcacggggggacgacggggacga gggagagcggcgaaggggacgtcggacgaggacgagaagggggccaggcagtggttgctc atcaagcgaagcgacgagttcgcggagaccgaccgtgacctgactgccgaggcacctcgt tcggtgctgagcgggctcaccgtcgaagagctggaggccggaaaagcgccgccagggagc cggtcgaagccggcggcgcgtgcaggtcgatcggcctcggcatcgacgaaggagcgtgca aagacgacccggaagccagcgaaggcggagggcgagaagccgggaaggaccgcgagggag gctgttcgggccgccgcgaagcgccacgtgcctctgagcaacccgaccaaggtgctctgg ccaggagaagggatcagcaagcgggatctccaggcgtactacgaggcggtcggtcccctg atgctgccttacctgcgtgaccgtccggtgatgctggtgcgctacccggacgggatcgag ggcaagcactttcaccagtggagcgcgccccggggcgcgccgagctggctccgcaccgcc cggctggagacggatcagccctcggaggcggtggacacgatcctgatcgacagcgtggag agccttctctacgtggccaacctggctgccatcgaggtgcacacgctggccgcgagggtg tcggagctcgggacctgcgacttcctgacgatcgatttcgacgtgaagcagtcctcgctg agagccgcggtgccgctcgccctggagctgcgtcaggagctggaggcggccgggcttcag ggctttccgaagacctcggggaagacagggctccatgtgctggtgccgctggggccgggg atccccttcgagacggcgaagatgctggctgacttgctcggtaggctgctggttcatcac gcgccggaggcggcgacgatggagcggttcatctcgcggcgggggaagcgggtgttcgtg gacacggggcagacggggcagcaccgcaccctcgtggccccgtacagcccccgagccgtt ccggagggcacggtctcgatgccactcgactgggaggaggtgacaccggcgctggatcct cgcgcgttcacgctggagacggtgccggggcggctcgaggaggtcggcgatcggctcgat gggctgctctcggcgcgaccggatgttccagacgcggtggcgcgcctggagcgcatggcg cgaaggaagagggctgcctag

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