Caulobacter vibrioides NA1000: CCNA_02115
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Entry
CCNA_02115 CDS
T00841
Name
(RefSeq) secreted pectate lyase-family protein
Organism
ccs
Caulobacter vibrioides NA1000
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Gene cluster
GFIT
Motif
Pfam:
Pec_lyase
Glyco_hydro_127
C5-epim_C
Glyco_hydro_88
Motif
Other DBs
NCBI-GeneID:
7330421
NCBI-ProteinID:
YP_002517488
UniProt:
A0A0H3C9J7
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Position
2263969..2265600
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AA seq
543 aa
AA seq
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MPLSPLSRRRLMATSAAAFAVAGALTPLRAFAAPTRDAALETMKKATRFMVDKVAYKGGY
VWSYLPDLSRRWGEMEAYPTMIWVQPPGTATMGHVFLDAYHATGDEAYYDAACKAAEALI
AIQHPAGGWNYLGDLAGEASIRKWYDTIGKNGWRLEEFQHYYGNATFDDAGTAESSQFLL
RLYVEKQDKRFKPALDKALQFVVDSQYPNGGWPQRFPLKTEFQNHGRPDYTGYITFNDDV
AGENIKFLIMIWQTLGDPRALPAIKKAMDCFVICQQPQPQPAWGLQHHVDTLKPAAARSY
EPEAFASHTTGANIASCMDFYQLTGDPKYLARLGEALDWLDSIRLPQEIQKGRPYPTFIE
VGTGKPLYVHRRGSNVVNGEYYTDENPHGTVIHYSSFRAVNVDGLRKRLAKLKAMSPEVA
SKDSPLKGGRKALPKYFTTGDISVSDLNVDTLKADAGQTSPDKVASLIASLNAEGWWPTE
LRATSNPYIGDGSPTPAPGDFSQTRVGDATDTSPYITDTPKIGISTGTYIENMAALIKYV
TAS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcagcccgctctcccgccgtcgtctcatggccacctcggcggccgccttcgct
gtagcgggcgctctgacgccgctgcgcgccttcgccgcgcccacccgtgacgccgcgctg
gagacgatgaagaaggcgacgcgtttcatggtcgacaaggtcgcctacaagggcggttat
gtgtggagctacctgcccgacttgtcgcgccgctggggcgagatggaagcctaccccacc
atgatctgggtgcagccgccgggcacggcgacgatgggccatgtgttcctggacgcctat
cacgccaccggcgacgaggcctattacgacgccgcctgcaaggccgctgaggccctgatc
gcgatccagcatcccgccggcggctggaactatctcggcgatctggccggcgaggcgtcg
atccgcaagtggtacgacacgatcggcaagaacggctggcggctggaggaattccagcac
tactacggcaacgccaccttcgatgacgcgggcacggccgagagctcgcagttcctgctg
cgtctctacgtcgaaaagcaggacaagcgcttcaaaccggccttggacaaggctctgcag
ttcgtggtcgacagccagtatccgaacggcggctggccccagcgcttcccgctgaagacc
gaattccagaaccatggccgccccgactatacgggctacatcactttcaacgacgatgtg
gccggggagaacatcaagttcctgatcatgatctggcagaccctgggcgatccgcgcgcc
ctgcccgccatcaagaaggcgatggactgcttcgtgatctgccagcagccccagccgcag
ccggcctggggcctgcaacaccatgtcgacacgctgaagcccgccgcagcccggagctac
gaacccgaagccttcgcctcccacacaacgggcgcgaacatcgcgtcttgcatggatttc
taccaactgaccggcgatccgaagtatctggcgcgcctgggcgaggcgctggactggctg
gacagcatcagactgccgcaggaaatccagaagggacgcccctacccgacctttatcgaa
gttggcacgggcaagccgctctatgtgcaccgccgcggcagcaacgtcgtcaatggcgaa
tactacaccgacgagaacccgcacgggacggtgatccactactcctcgttccgcgcagtg
aacgtcgacggcctacgcaagcggctggccaagctcaaggccatgtcgcccgaagtcgcc
agcaaggactcgccgctcaagggcggtcgcaaggcgctgccgaagtacttcaccaccggc
gacatctcggtctctgacctgaacgtcgacaccttgaaagccgacgctggccagacctcg
ccggacaaggtcgccagcctgatcgcatcgctgaacgccgagggctggtggcccacggag
ctgcgggccaccagcaacccctatatcggcgacgggtcgcccactcccgcgcccggcgac
ttcagccagacccgcgtgggggatgcgacggacacctcgccctacatcaccgatacgccg
aaaatcggcatttcgaccggaacctacatcgagaacatggcggcgctgatcaagtatgtg
acggccagctag
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