Cupriavidus sp. USMAHM13: BKK81_04310 Help Entry BKK81_04310       CDS       T04762                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism ccup  Cupriavidus sp. USMAHM13 Pathway ccup02020   Two-component system ccup02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:ccup00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     BKK81_04310  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     BKK81_04310  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ccup03021]     BKK81_04310 Transcription machinery [BR:ccup03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      BKK81_04310 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_IclR HTH_23 Motif Other DBs NCBI-ProteinID:  AOY98589 LinkDB All DBs Position 1:complement(949460..950935) Genome browser AA seq 491 aa AA seqDB search MKPSLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVEQALIENPLLERENDWIESPLRV AADGSINVQSAPAPAPAEAQGNGEARSDEGGGDEERFGDGADDYGSDWSLDDFARRPQGD EDEKAPLQLRDAEPTLREHLMEQLAPLKISARDKGLAIFLIESLDDDGYLSATLEEICEE LPEELEFEIEEVQAMLALLQSFDPPGVGARNAAECLALQLRRLSHPQRELALGIVNHHLE LLAARDYTRLKKALQVDETALKAAHDLIRSLAPYPGHAYNRPQADFVVPDVFVRKSGSGW IAQLNPDVMPRLRINDMYAQILRGAKGESGAAGLQQKLQEARWLIKNIQQRFDTILRVAQ AIVERQKNFFSHGEIAMRPLVLREIADTLGLHESTISRVTTNKYMATPMGTFELKYFFGS HVSTETGGAASSTAIRALIKQLIGAEDPKNPLSDSRIAELLGDQGFVVARRTVAKYREAL KIPAVNLRKSL NT seq 1476 nt NT seq  +upstreamnt  +downstreamnt atgaaaccttcgcttcagctccgcctttcccagcatctcgcactgacgccacagcttcag cagtcgatccggctgttgcagctttccacgctcgaactgcagcaggaagtcgagcaggcc ctgatcgaaaaccctctgctcgagcgcgaaaacgattggatcgagagcccgctgcgggtg gccgccgatggcagcatcaacgtgcagagcgcacccgcgccggccccggccgaagcgcag ggcaatggcgaggcacgcagcgacgagggcggcggcgatgaagagcgcttcggcgacggc gccgacgactacggcagcgactggagcctggacgacttcgcgcgtcgcccccagggcgac gaagacgagaaggcgccgctgcaactgcgcgacgccgagccgaccctgcgcgagcacctg atggaacagctcgcgccgctgaagatctcggcgcgcgacaagggcctggccatcttcctg atcgagtcgctcgacgacgacggctacctcagcgccacgctcgaggagatctgcgaagag ctgcccgaagagctggagttcgagatcgaggaagtgcaggccatgctggccctgctgcag agcttcgatccacccggcgtgggagcgcgcaatgcggccgaatgcctggcgctgcagctg cggcggctgtcgcatccgcagcgcgagctggcgctgggcatcgtcaaccaccacctggaa ctgctggccgcgcgcgattacacgcgcttgaagaaggcgctgcaggtggacgagacggcg ctgaaggcagcacatgacctgatccgctcgctggcaccgtatccgggccacgcctacaac cgtccgcaggccgacttcgtcgtgcccgacgtgttcgtgcgcaagagcggcagcggctgg atcgcccaactcaatcccgacgtgatgccgcgcctgcgcatcaacgacatgtacgcgcag atcctgcgcggcgccaagggcgaatccggtgccgccggcctgcagcagaaactgcaggaa gcccgctggctgatcaagaacatccagcagcgcttcgacaccatcctgcgtgtcgcacag gccattgtcgagcgtcaaaagaacttcttcagccacggtgaaattgcgatgcgccccttg gttttgcgggagattgccgatacactgggattacacgagtcaaccatctctcgggtgacg actaacaaatacatggccacccccatgggcactttcgagctgaagtacttcttcggcagc catgtgtccacggaaacgggcggcgctgcttcatcaacggctatccgagccttgatcaag caactgataggagccgaagacccgaagaatcccctgtccgacagccgaattgccgaattg ctgggcgatcagggcttcgtcgtggcgcgccggacggtcgccaagtaccgagaagcgctg aagatcccggcagtcaatctccgcaagtctttgtag

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