Cupriavidus sp. USMAHM13: BKK81_09555
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Entry
BKK81_09555 CDS
T04762
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ccup
Cupriavidus sp. USMAHM13
Pathway
ccup03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BKK81_09555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccup03400
]
BKK81_09555
Enzymes [BR:
ccup01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BKK81_09555
DNA repair and recombination proteins [BR:
ccup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BKK81_09555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AOY99484
LinkDB
All DBs
Position
1:2159577..2160560
Genome browser
AA seq
327 aa
AA seq
DB search
MTDRRARFLEVLGITHEWLPRGLPPLAAEAAPLAEPMEPMEAVEAVEALAVAPVEAMAPL
RDDPAVSVPQAVLPPARLPQAAGTGMEAATPAVADMAAARPPAPSAMPPHAQVPVPARQA
VATQGEADGALSARAAGIASLDWPALEAQVSGCTACKLCSTRTQTVFGVGDPQADWMLVG
EAPGENEDKQGEPFVGQAGKLLDNMLGSLGLARGNRVFIANVLKCRPPGNRNPEPEEVVQ
CEPFLKRQIALIRPRLIVVLGRFAAQSLLRTTTPISKLRGTVHSYEGIPVVVTYHPAYLL
RTPADKARAWDDLCLAREVHDRAGAEA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgacggaccggcgcgctcgattcctggaagtgctcggcattacccatgagtggctgccg
cgtgggctgccgccgctggccgccgaagccgcaccgctggcagagcccatggagccgatg
gaagcggtagaggcagtggaagcgctggcggtggcgccggtggaagccatggccccgctg
cgggacgatccagccgtgtccgttccgcaagcggtcttgccgcctgcgcgcctgccgcaa
gccgctggcactggcatggaagccgccacgccggccgtggcggacatggcggcagcccgc
ccgccggcgccgtccgccatgccgccacacgcgcaggtgccggtccccgcgcggcaagcc
gttgccacgcagggcgaggccgacggtgcgctgtcggcccgggctgccggcattgcctcg
ctcgactggccggcgctggaagcccaggtgtccggctgcaccgcctgcaagctgtgcagc
acgcggacgcagaccgtgttcggcgtgggcgacccccaggccgattggatgctggtcggc
gaggccccgggcgagaacgaggacaagcagggcgaacccttcgtcggccaggctggcaag
ctgctggacaatatgctgggctcgctcggcctggcgcgtgggaaccgcgtcttcatcgcc
aacgtgctcaagtgccggccgccgggcaaccgcaacccggagcccgaggaggtggtgcaa
tgcgagcccttcctgaaacgccagatcgccctgatccggcccagactgatcgtggtgctg
ggacgcttcgccgcgcagagcctgctgcgcaccaccacgccgatcagcaagttgcgcggc
accgtgcacagctacgagggtatcccggtggtggtgacctaccatccggcctacctgctg
cgcaccccggccgacaaggcacgtgcctgggacgatctctgcctggcgcgcgaggtacac
gaccgtgcgggagccgaggcttga
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