Corvus cornix (hooded crow): 104683403
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Entry
104683403 CDS
T03546
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104683403 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104683403 (MBD4)
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104683403 (MBD4)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
104683403 (MBD4)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104683403 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
DUF4245
Motif
Other DBs
NCBI-GeneID:
104683403
NCBI-ProteinID:
XP_039415088
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All DBs
Position
12:complement(20545394..20549131)
Genome browser
AA seq
507 aa
AA seq
DB search
MAAPGAGNGPGDGSRSAAAERPGPSPRGREHGPAGPSAVPRGWQRVSSRRRAGRTAGRID
VCFISPEGKKLRSKRALVEYLQKTGETTLKAADFDFTAPRGSTHSGLRGCGMGAVRTDLE
KEDCQSKVQELHAQNGAEVGIQNIQAGNGHLGDVTSTVERTDLVMEGINPEEGLKTKRKG
VDGKSVQTRKPGKGSERKNQGDPKSKRQRRLSNTQETECVQNKRVRRQTDTRGADSQGVG
AGKALSAMSRARLRSVAGSQRELGHLPKEGPGSSGTRAVASEEKSYGLETGKVPDPGDLG
KQNVKSDTEVDAEPWDRTTFTAVRMSPEESVPRTQVERRKTSPYFSSKYNKEAPSAPRRK
ALRKWTPPRSPFNLIQETLFHDPWKLLIATIFLNKTSGKMAIPVLWEFLKKYPSPEVARA
ADWKEMSELLKPLGLYELRAKTIIRFSGEYLSKAWRYPIELHGIGKYGNDSYRIFCVNEW
KEVQPQDHKLNVYHTWLWENREKLSID
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgggagcggggaacggccccggggacggcagtcgaagcgcggcggcggaa
cggcccggccccagccctcgcggcagggagcacggcccggcggggcccagcgccgtcccc
cgcgggtggcagcgggtgagcagccgccggcgggcgggcaggacggccgggaggatcgac
gtgtgtttcataagccctgaagggaagaagctgaggtcaaaacgagcacttgtggagtat
ttacagaaaactggggagacaacactgaaagcagcagattttgatttcacagctcctcga
gggagcacacactcagggttgagaggatgtggcatgggagccgtgaggactgacctggaa
aaggaggattgtcagagcaaagtgcaggagctccatgcacagaatggtgctgaggttgga
attcagaacatccaggctggaaatggacacctgggagatgttacatctactgtggaacgc
acagatttagtaatggaaggcataaacccagaggaaggtttgaaaaccaaaagaaagggg
gtagatgggaaaagtgtccaaactaggaaacctgggaagggctcagaaaggaagaaccaa
ggtgaccccaagagcaagaggcagagaagactctctaacacacaggagactgagtgtgtt
cagaacaagagggtccggagacagacagacacacgtggagctgacagccagggtgtgggt
gcagggaaagctctgtcagcaatgtccagggcacggctgaggtcagtggctggctcacag
agggagctgggtcacctgccaaaggaggggccaggctccagtggcacacgtgctgtggca
tctgaagagaaatcctatggactggagacagggaaggtgccagatccgggggatctgggt
aagcagaatgttaaatctgacacggaggtggatgctgagccatgggacaggacaacattc
acagcagtcagaatgtcaccagaagagtctgtcccacgcacacaagtggagagaaggaaa
acaagtccatatttttccagtaaatacaacaaagaagcccccagcgcacccagaaggaag
gccctcagaaaatggactcctccacgttctccttttaatcttatccaagaaacactcttc
catgatccatggaagcttctcattgccaccatatttctcaataaaacttcagggaaaatg
gccattccagtgctctgggagttcctgaagaagtatccttctcctgaggtagccagggct
gcagactggaaagagatgtcagagctgctcaaacctctcggcctctatgaactcagagcc
aaaaccatcatcaggttctcaggtgagtacctgagcaaggcgtggcggtacccgattgag
ctgcacggcattggcaagtacgggaatgactcctacagaatcttctgtgtcaacgaatgg
aaggaggtgcagccacaggaccacaagctgaatgtataccacacgtggctgtgggagaac
cgggagaagctgagcatcgactga
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