Corvus cornix (hooded crow): 104683522
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Entry
104683522 CDS
T03546
Symbol
PLXND1
Name
(RefSeq) LOW QUALITY PROTEIN: plexin-D1
KO
K06822
plexin D
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
104683522 (PLXND1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
TIG_2
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
104683522
NCBI-ProteinID:
XP_039415141
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All DBs
Position
12:complement(20593352..20663798)
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AA seq
1947 aa
AA seq
DB search
MAPAPVLAPAAGAEPRPPALLPLLLPLLLPLLPLLLPGRAAGLEVQRKFLSPTLTNNFAL
DGPGSRVYLAAVNRLFQLSGGELALEAEAAVGPVLDSPLCHAPQLPQASCEHPRVLTNNY
NKILQPDPEQGVLVVCGSIYQGLCQLRSMANISAVAVRFPPGGSDSVTVFPSMLNVAANH
PNASTVGLVLRRGGGGGARLLVAATYTGFGSPFFPRNRSLEDHRFENTPXIAIRALNARG
DLAKLFTFDINPSDDNILKIKQGDKARHKLSFVRAFLQHGAAPPARRPYAYLALNSEANA
GDKESPAHSLLARICLGEPAEATLNGSGETKKLTESYIQLGLRCGGAADAFTRLVSVFPA
RAAWRSPAAPHGPAPAPPPPEELLFGVFERAGAGGGRGRPQSALCVFRFAEIEETIRAAR
NSCFVSPAAGMVTVLDSVVQGTXPACEKRNIQLQPEQLDCGAAHLQHPLAIVNPVTATPI
FTYSGLTAVAVASVNNYTVVFLGTASGGLLKINLDSTMRVISRRSISVAYGEPVHPIMQF
DPSDSTYLYLMTSYQMTRVKVAACSQYSTCTECLAAADAYCGWCTMETRCSLQHECTNFT
GANFWASVSEGVQQCPSMTILEPEINIDKENPALIIQINGTIPNLNGTNISCDYGNNIHT
VARVAGDYVNQFIYCSLLPHEKYPAFPHDQDHVVVETSLRVNNKNIIRANFTIYDCKRIG
NIYPKRACTSCLSARWKCHWCPSAYTCVSNHSQCDDMLQMKKKIDCPQIVPAPLEPMPTG
VSRDIMISLANATFSKETALECHFGTDRTFEARWVNSSAVECVRVLLHTSEKSHHFPVNL
QLKDRPDRFIDSPEMMTVEVYNCATGSADCSQCLGREDLGHRCLWSESSSSCRLHTEPPQ
VSEVCPPPEIRKIEPLHGPLEGGTLLTIRGRNLGRRFRDILGAIRVGSVPCTPLPDRYVV
SETVVCQTGEAHEAFSDVVTVNVSREGRSRERYSYVLPVVQSVAPPNGPKAGGTRVTIRG
TKLDVGSELRVLINSSKQCTDLSRTDSIITCTMPAAELTAAVPVCVQFENKSCASHNITF
KYEKNPVISDINPKKSQISGGRIITLEGRGFGLVQNVSMAVRGIGREHTRCKVHTDTAIT
CPSPAASNITVGSKPAPVDFYLNGRLYTDDRSALDEEMYPEEALHISKFSLGYYADPQFS
TAKKEKWIKHHPGEPLTLVIHKEPDSLGLESNEYQVKIGLISCEIQIVSDKVIHCSINES
LSSSERQLPVTIQVGKFNYTIAMLHLGGGETAIIVSIVICSILLVLSVVALFVFCTKSRR
AERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTF
FPKCSSLYEECYILPAQQLSSQVGSQVQETHPLLVGEWKIPENCRPNMEEGISLFSTLLN
NKHFLIVFVHALEQQKDFAVRDRCNLASLLTIALHGKLEYYTSIMKDLLVDLIDASASKN
PKLMLRRTESVVEKMLTNWMSICMYSYLRETVGEPFFLLICAIKQQINKGSIDAITGKAR
YTLNEEWLLRENIEAKPRNLNVSFQGCGMDSLSVRAMDTDTLSQVKEKILEAFCKNVPYS
QWPRVEDVDLEWFATSTDSYILRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLTDKK
DTTLSRVKDLDTEKYFHLVLPTDESVEHKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFL
DDLFKAILSIRDDKPPVAVKYFFDFLEEQAEKRGITDPDTLHIWKTNSLPLRFWVNILKN
PQFVFDIDKTDHIDACLSVIAQAFIDACSLSDLQLGKDSPTNKLLYAKEIPEYRKIVQRY
YKQIHDMPPLSEQEMNAHLAEESRKYRNEFNTNVAMAEIYKYAKRYRSQIVAALDANPTT
KRTQLQHKFDQVIALMEDNIYESCSEA
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atggctccggctccggtcctggctccggcggcaggcgctgagccgcggccccccgcgctt
ctgccgctgctgctgccgctgctgctgccgctgctgccgctgctactgcccgggcgagcc
gccggcctggaggtgcagcgcaagttcctctcgcccaccctcaccaacaacttcgcgctg
gacggccccggctcccgcgtttacctggcggccgtcaaccggctgttccagctgtcgggg
ggcgagctggcgctggaggcggaggcggcggtagggccggtgctggacagcccgctgtgc
cacgcaccgcagctgccgcaggcctcctgtgagcaccccagggtgctcaccaacaactac
aacaagatcctgcagcccgacccggagcagggcgtccttgtcgtctgcggctccatctat
cagggcctctgccagctgcgcagcatggccaacatctcggccgtggccgtgcgcttcccg
ccgggcggcagcgactcggtcactgtcttccctagcatgctgaacgtggcggccaaccac
cccaatgcctccaccgtggggctggtgctgcgccgcggcggtggcggcggggcgcggctg
ctggtggccgctacctacaccggcttcggcagccccttcttcccccgcaaccgcagcctg
gaggaccaccgcttcgagaacacgccgnagatcgccatccgcgccctcaacgcccgcggc
gacctggccaagcttttcaccttcgacatcaacccctccgacgacaacatcctcaaaatc
aagcagggcgacaaggcgcggcacaagctcagcttcgtccgcgccttcttgcagcacggg
gccgcgccgcccgcccgccgcccgtacgcctacctggcgctcaacagtgaggccaacgcg
ggcgacaaggagagcccggcgcacagcctactggcccgcatctgcctgggcgagccggcc
gaggccaccctcaacggcagcggcgagaccaagaagctgaccgagtcctacatccagctg
gggctgcgctgcggcggcgccgccgacgccttcacccgcctcgtctccgtcttcccggcg
cgggcagcttggcgcagccccgctgctcctcacggcccggccccggccccgccgcccccc
gaggagctgctcttcggcgtcttcgagcgggccggagccggcggcggccgggggcggccg
cagtccgcgctctgcgtcttccgcttcgccgagatcgaggagacgatccgagccgcccgc
aactcctgtttcgtgagcccggccgccggcatggttaccgtgctggacagcgtggtgcag
ggcactnggccggcctgcgagaagaggaatatacagctgcagccggagcagctggactgt
ggagccgcacaccttcagcacccactggccatcgtgaaccctgtcacagccacccccatc
ttcacctacagcggcctgactgcggtggcagtggccagtgtcaacaactacacagtcgtg
ttcctgggcacggccagtggaggactcctgaagatcaacctggacagtacaatgagggtt
attagcaggagatccatttcagtggcttacggagagcctgtccatcccatcatgcaattt
gacccttctgattccacctacctctacctgatgacctcttaccagatgacgcgggtgaag
gtggctgcctgcagccagtactcgacatgcacggagtgcctggccgccgctgatgcctac
tgcgggtggtgcacgatggagaccaggtgttctctgcagcatgaatgcaccaacttcaca
ggggccaacttctgggcgagtgtgagtgaaggagtgcagcagtgcccctccatgaccatc
ctggagcctgagatcaatattgacaaagagaacccggccctaataatacaaataaatgga
actatcccaaacctgaatggaacaaatatttcgtgtgactatggaaacaacatccacacg
gtagccagagttgctggggattatgtaaaccaatttatttactgcagtttgcttccacac
gagaaatatccagcatttcctcatgaccaagaccacgtggttgttgaaacctctctccgg
gtcaacaacaaaaacattatccgggccaatttcaccatctatgattgcaaaaggattgga
aacatttacccaaagagagcgtgcaccagctgcctctcagccaggtggaagtgtcactgg
tgcccctccgcctacacctgcgtctccaaccactcacagtgtgacgacatgctgcagatg
aagaagaaaattgactgtcctcaaatagtacctgcccctttggagccgatgcccacgggt
gtatctcgggacatcatgatctcactggccaatgcaactttctctaaggagacagctctg
gagtgccattttgggacagacaggacatttgaagcccggtgggtgaactcctctgccgtg
gagtgtgtacgtgtgctgctccacacatcagaaaaaagccatcacttcccagtgaacctc
cagctgaaggacagaccagacagatttatcgacagtccagagatgatgacagtggaggtg
tacaactgtgcgaccggcagtgccgactgctcccagtgcttggggagggaggacctgggg
caccgctgcctctggagtgagagcagctccagctgcaggctgcacaccgagcctccacag
gtctctgaagtctgcccacctcctgagatccggaagatcgagccactgcatggacctctg
gaggggggcacactgctgaccatccgtgggaggaacctgggccgccgcttcagagacata
cttggcgccatcagggtgggcagcgtgccctgcaccccactgccagatagatacgtcgtc
tctgagacagtcgtgtgccagaccggggaggctcacgaggcattttcggatgtggtaacg
gttaacgtgagccgggaagggaggtccagggaacgatactcctacgtgcttcctgtggtg
cagtccgtggctcctccaaatggcccgaaggcaggaggaacaagagtgaccatcagaggc
accaagctggacgtcggctcagagctccgtgtcctcatcaactcctccaagcagtgcact
gacctcagccgcaccgacagcatcatcacctgcaccatgcccgctgcggagctcactgcg
gctgtgccagtctgcgtgcagttcgagaacaagtcctgtgccagccacaacatcactttc
aagtatgagaagaacccggttatatcagacatcaaccccaaaaagagccagatcagtggg
ggcaggatcatcaccctggaaggaagaggttttgggctggtccagaatgtgtccatggct
gtccgtggcatcggcagagagcacacgcgctgtaaggttcacactgacaccgccatcacc
tgcccctctccagctgcctccaacattactgtggggagcaagccggcccccgttgatttc
tatctcaatgggcgcctctacacagatgaccgctcggctctggatgaggagatgtacccc
gaggaggccctgcacatcagcaaattcagcctggggtactacgctgacccccagttctcc
acagccaagaaggagaagtggatcaagcaccatcctggcgagcccttaactctggtcata
cataaagagcctgacagcctgggcctggagagcaatgagtaccaggtgaaaatcggcttg
atctcgtgtgagatccagattgtttcagacaaagtcatccactgctccatcaatgagtca
ctgagctcctcggaaaggcagctacctgtgacgatccaagttggcaagttcaactacaca
attgccatgctgcaccttgggggaggagaaaccgcgatcattgtctccatcgttatctgc
agcatcctgctggtcctctctgtcgtagctctctttgtgttctgcacaaagagccgcaga
gccgagcgctactggcagaaaaccctgctccagatggaggagatggagtcgcagatccgg
gaggaaattcgtaaaggttttgcagagctgcagacagacatgacggacctgaccaaggag
ctaaaccgcagccaggggatccccttcctggagtacaagcactttgtcaccaggacattc
ttccccaaatgttcctctctctacgaggagtgctacatcctgccagcccagcagctcagc
tcacaggtgggctcccaggtccaggaaacacatccactcctggtgggggaatggaagatt
cctgagaactgcagacccaacatggaagaaggaatttctctgttctccaccttactcaac
aacaagcacttcctcatcgtgtttgtccacgctctcgagcaacagaaggactttgctgta
agagacaggtgtaacctggcctccctgcttactattgcattgcatgggaagctggagtat
tacaccagcatcatgaaggacctcttggtggatctaatagatgcttcggcttccaaaaac
cccaagctgatgctaaggaggacagaatctgtggtggagaagatgctcacgaattggatg
tccatctgcatgtacagctatctcagagagacggttggagagcccttcttcctgctgatc
tgtgccatcaaacagcagattaacaagggttccatcgacgccattacagggaaggccagg
tacaccctcaacgaggagtggctgctgagggagaacatagaggcaaagccgaggaacctc
aacgtctccttccaaggctgtgggatggattccctgagcgtcagagccatggacacggac
acactcagtcaagtgaaggagaaaattctggaggccttctgcaagaacgtcccctactcc
cagtggccaagggtggaagacgttgacctcgagtggttcgctaccagcactgacagctac
atcctgcgggacctcgatgacacgtcggtggtggaggacggcaggaagaaacttaacaca
ttagcacattacaagatccctgaaggggcatccctggccatgagtttgacggacaagaag
gacaccacactgagcagagtgaaggatttggacactgaaaagtacttccacttggttctc
ccaactgatgaatcagtggaacataagaagtcccacagacagagccataggaagaaggtc
cttccagaaatctacctgacaaggctactctccaccaagggcacactccagaagttcctg
gatgacttgttcaaagccattctcagtatccgagacgataaaccacccgtggctgtgaag
tatttctttgacttcctagaggagcaggcagagaagagagggatcacagaccctgacact
ctgcacatctggaagaccaacagcctaccgctgaggttttgggtcaacatcctgaaaaac
ccccagttcgtctttgacattgacaagacagaccacatcgacgcctgtctgtctgtgatc
gcccaggccttcatcgatgcctgctcgctctccgacctgcagctgggcaaggactcccca
accaacaaactgctgtatgccaaggagatccccgagtaccggaagatagtgcagagatac
tacaagcaaatccacgacatgccccctctgagtgagcaggagatgaatgcccacctcgcg
gaggagtcacggaaataccgaaatgagttcaacaccaatgttgccatggctgagatatac
aaatacgctaagagataccgctcccagatcgtggccgccctggatgcaaaccccacgaca
aagcgcacccagctccagcacaaatttgaccaagtgattgcactcatggaggacaacatc
tatgagtcctgcagtgaagcctag
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