Corvus cornix (hooded crow): 104685032
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Entry
104685032 CDS
T03546
Symbol
LFNG
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00514
Other types of O-glycan biosynthesis
ccw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
104685032 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104685032 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccw01003
]
104685032 (LFNG)
Enzymes [BR:
ccw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
104685032 (LFNG)
Glycosyltransferases [BR:
ccw01003
]
Glycan extension
O-Glycan
104685032 (LFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
104685032
NCBI-ProteinID:
XP_039416328
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Position
14:4820438..4831794
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AA seq
367 aa
AA seq
DB search
MLKSCGRKLLLSLVGSMFTCLLVLMVEPPGRPGLAXGEAGGAQRALQSLGAAAAVAPPAA
QGPPGLRSFADYFGRLSRARRELPPAPPSPPRPPAEDISPRDVFIAVKTTKKFHKARLEL
LLDTWISRNRDMTFIFTDGEDEELKKQARNVINTNCSAAHSRQALSCKMAVEYDKFIESG
RKWFCHVDDDNYVNVRMLVKLLSSYPHTQDIYIGKPSLDRPIQATERISENKMHPVHFWF
ATGGAGFCISRGLALKMSPWASGGHFMSTAEKIRLPDDCTIGYIIESVLGVKLIRSNLFH
SHLENLHQVPKSEIHKQVTLSYGMFENKRNSIHMKGAFSVEEDPSRFRSVHCLLYPDTPW
CPTNMVY
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagctgcgggaggaagctgctcctgtccctcgtgggctccatgttcacctgc
ctcctggtgctcatggtggagccgccggggaggccggggctggccncgggggaggccggc
ggggcgcagcgggcgctgcagagcctgggggcggcggcggccgtggcccccccggcggcg
caggggccgcccgggctccgcagcttcgccgattacttcgggcggctgagccgagcgcgc
cgggagctgccccccgccccgccgagtcccccgcggccgccggctgaggacatctccccc
cgcgatgtcttcatcgccgtcaagaccaccaagaagtttcacaaggcgcggctggagctg
ctgctcgacacctggatctcccgcaaccgcgacatgaccttcatcttcactgacggggag
gatgaggagctgaagaagcaagcacgaaacgtcatcaacaccaactgctcggctgcccac
agccgccaggccctgtcctgcaagatggccgtggagtacgacaagttcatcgagtccggc
agaaaatggttctgccacgtggacgatgacaactacgtgaacgtgcggatgctggtgaag
ctgctctccagctacccccacacacaggacatctacatcgggaagcccagcctggaccgg
cccatccaggctacggagaggatcagtgagaacaagatgcatcctgtgcatttctggttt
gccacgggtggagcggggttctgtatcagccgggggctggcactgaagatgagcccttgg
gccagtgggggtcacttcatgagcactgcagagaagatccgcctgcccgacgactgcacc
atcggctacatcatcgagtctgtgctgggcgtgaagctcatccggagcaacctcttccac
tcgcacctggagaacctccaccaggtgcccaagtcggagatccacaaacaggtgacactg
agctatggcatgttcgaaaacaagcgcaactccatccacatgaagggagccttttctgtc
gaggaggacccatccaggttccgctccgtgcactgcctgctgtaccccgacacgccgtgg
tgccccaccaacatggtttactag
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