KEGG   Corvus cornix (hooded crow): 104686001Help
Entry
104686001         CDS       T03546                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
ccw  Corvus cornix (hooded crow)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ccw00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    104686001 (LIG4)
Enzymes [BR:ccw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     104686001 (LIG4)
DNA repair and recombination proteins [BR:ccw03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     104686001 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Unknown
AA seq 912 aa AA seqDB search
MASAPVSQPPPKKTVASHVPFADLCSTLERIQKCKSRPEKTKYFKDFLDSWRKFHDALHK
KEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLHLPKDGKDAAKLLNYRTP
TGSRGDAGDFAMIAYFVLKPRSPKQGRLTIEQVNEHLDAIANNNAAKNKGQLKKSLLQLI
TQSTALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPSVSL
SDVSITLFSAFKPMLAAIADVQQIEKQMSNQTFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYTQQFGASPLEGSLTPFIHNVFKSNIKNCILDGEMMAYNPETQTFMQKGNKFDIKRMV
EDSDLQTCFCVFDVLMVNDQKLGHEVLSKRYEILSSVFTLVKGRIHVVHKRSARTRKEVI
DALNEAIDNREEGIMVKDPMSVYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGS
RGGMMSHFLCAIAETPPPNEKPTIFHSICRVGSGCTMKELYDLGLKLAKYWKPYHRKDPP
GNILCGTEKPEMYIEPCNSVIVQIKAAEIVDSDMYKTDCTLRFPRIEKIREDKEWYECMT
SDMLEDLRSKAQGKLASKHLHIDEYDEPHEKKRKTVSKVRKIIGIAEQFKAPDLSSVSKV
SNVFEDVEFCVMTGTGKYSKSELESRIAQCGGSVVQNPGPETYCVIAGAENVRVKNIIAS
NKYDVVRAEWLLQCFQTKMLVPWQPAFMIHMSPDTKEHFAREYDCYGDSYTANTDVAQLK
EVFSRMKDSKAMPLHLIAELEERYWWNSCQLGIFRGSTVYVDCYAVVNEPKSKIPGNTLS
IRALELRFYGAKVVSQLKEGVSHVVIGEDHSRVEEMKALRRTFRKKFKIVSELWVTHSVE
EGVTKNESQYLF
NT seq 2739 nt NT seq  +upstreamnt  +downstreamnt
atggcttctgcacctgtttcgcagcctcctcccaaaaaaacggtggcctctcacgtgcct
tttgccgatctgtgttctacactggagcgaatacagaagtgtaaatctcgtccagagaaa
accaagtatttcaaggattttctggattcctggaggaaattccatgatgcacttcataaa
aaagagaaagatgtcacagattccttttacccagctatgcgacttattctcccacagttg
gaaagagaaaggatggcatatggaattaaagaaactatgcttgcaaaactctatattgaa
ctgcttcatttaccaaaagatggaaaggatgctgcaaagcttttaaattacagaacacct
acaggctcacgtggagatgctggagattttgcaatgatcgcatactttgtgctgaaacct
aggagcccaaaacaaggcagactgacaatagaacaagtaaatgaacacttagatgcaata
gctaataataatgctgctaaaaacaagggtcagttaaagaaaagtcttcttcagttaatt
acccagagcacagcactggaacaaaaatggcttatccgaatgattataaaggatctaaag
cttggtgttagtcaacaaactatattttctattttccatcctgatgctgctgaattgcac
aatgttactactgatttggaaaaagtttgcagacaactgcatgatccgtctgtctcactt
agtgatgtttctatcacgttgttttctgcctttaaaccaatgcttgctgctattgcagat
gtccagcaaattgagaaacaaatgagtaaccagacattctacatagaaactaagctggat
ggtgaacgtatgcagatgcacaaagatggggatgtgtacaagtatttttcccgaaatggg
tttgactatactcagcagtttggtgcttcaccccttgaaggttcattaacgccatttatt
cataatgtatttaagagcaatataaaaaattgcattcttgatggtgaaatgatggcttac
aatcctgagacacaaacctttatgcaaaaaggaaacaaatttgacatcaaaagaatggtg
gaggactctgatctgcagacctgcttctgtgtatttgatgtattgatggttaatgatcag
aagttggggcatgaagtactaagcaaaagatatgaaatattaagtagtgtgtttactctg
gtaaagggcaggatacatgttgtccataagagaagtgccagaacaagaaaagaagtaatt
gatgctttaaatgaagcaatagataacagagaggaagggattatggtaaaagatcccatg
tctgtatacaagcctgacaaacgtggggaaggctggttaaaaatcaagccagaatatgtc
aatggactgatggatgaactggaccttttaattgttggtggttactgggggaaggggtct
cgtggtggaatgatgtctcattttctgtgtgctattgccgagacgccccctccaaatgaa
aaaccgaccattttccactccatttgtcgtgttggctctggctgtactatgaaagagttg
tatgatctgggcttgaaactggctaaatactggaagccctaccataggaaggatcctcct
ggtaacattttgtgtggaactgaaaaacctgaaatgtacattgaaccttgcaactctgtc
atagttcagatcaaggcagctgagattgttgacagtgatatgtacaaaactgactgtact
ttgagattcccccgaattgagaagataagggaagacaaagaatggtatgagtgcatgact
tcagacatgttagaagacctcagaagcaaagcacaaggaaagctggcatctaagcacctt
catatagatgagtatgatgagccacatgagaaaaaaaggaaaactgtttcaaaggtgagg
aagataattggcatagctgagcaatttaaagctcctgatctttctagtgtaagcaaggtt
tcaaatgtatttgaagatgtcgagttttgtgttatgacaggaacgggaaaatactcaaag
tctgagctggaaagcagaatagcccaatgtggtggcagtgtggtgcagaacccagggccg
gagacttactgtgtcattgcaggagctgagaatgtcagagtgaaaaacatcattgcttcc
aacaaatatgatgtggtgagggcagagtggctccttcagtgttttcaaaccaaaatgctg
gtgccttggcaaccagcctttatgattcacatgtctcctgacacaaaagaacattttgct
cgtgagtatgattgttatggagacagttacacagcaaacacagatgttgcacagctcaag
gaagtgttctcaagaatgaaagacagtaaggcaatgcctctgcacttgattgcagagcta
gaagaacgttactggtggaacagctgtcagctcggtatattcagaggaagcactgtttat
gtggactgttacgctgttgttaatgagcccaaaagcaaaatccctggaaatacactatca
attagagctttggagctccgtttttatggtgcaaaagtagtttctcagctcaaagagggt
gtctcccatgttgttataggagaagatcattcacgggtagaagagatgaaagcactcagg
agaacatttcggaaaaaatttaaaattgtatctgagctgtgggtaacacactcagtggag
gaaggagtcacaaagaatgaaagtcagtacttgttttaa

DBGET integrated database retrieval system