Corvus cornix (hooded crow): 104686228
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Entry
104686228 CDS
T03546
Symbol
USP9X
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccw01002
]
104686228 (USP9X)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104686228 (USP9X)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104686228 (USP9X)
Peptidases and inhibitors [BR:
ccw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104686228 (USP9X)
Ubiquitin system [BR:
ccw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104686228 (USP9X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
FAST_1
Vps23_core
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
104686228
NCBI-ProteinID:
XP_039408234
LinkDB
All DBs
Position
1:110831729..110933500
Genome browser
AA seq
2552 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQGQADAPPQL
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNP
HCKFHLYNGTRPSETVPAGVQLAEDELYARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSGSALNVQIIAALIKPFGQCFEFLTLHTVKKYFLPIIEMVPQFLENLTDDELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSAYMESMRQYAKEHGEYDPQTVRPGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GNDDIANRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQVE
DLDIWSHTNDTIGQVRRCILNRIKANSAHTKVELFIGGELVDPADDRKLIGQLNLKDKTL
ITAKLTQINSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHPRYISF
LWQVADLGSSLNMPPLRDGARVLMKLMPPDNTTVEKLRAICLDHAKLGESSLSPSLDSLF
FGPSASQVLYLTEVVYALLMPASAPLGEDASDFQYNFLKSGGLPLVLSMLTRNNFLPNAD
METRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPVVEGTSTISPINQATHDQAVVLQN
ALQNIPNPTSECMLRNVAIRLAQQISDEASKYIPDICVIRAVQKIVWASGCGSVQLVFSS
NEEISKIYEKTNAGNEPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTFIIDLL
LHCHSKTVRQMAQEQFFLMATRCCMGQRPLLFFITLLFTVLGSTARERAKHSGDYFTLLR
HLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDEVKRTGETGVEETILEGHLGVTKELLAF
QTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIPVCSSPATINA
GFELLVALAVGCVRNLKQIVDTLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFVGLK
NAGATCYMNSVIQQLYMIPAIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRDDVFGY
PHQYEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNL
REQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTL
NVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRF
DYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQIIQNEQSENEHSGST
KYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCF
GGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDKDNELIKYISEIAITTKPHQI
KMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEEIT
MISIQLAARFLFTTGFHTKKIVRGPASDWYDALCILLRHSKNVRFWFAHNVLFNVSNRFS
EYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCQSPFASPGPSSQAYDNLSLSDHLLRAVL
NLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLNVPATFMLVALDEGPGPPIKYQ
YAELGKLYTVVSQLIRCCNVSSRMQSSINGNPPLANPYGDPNLSQPIMALQQNVADILFV
RTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLL
QILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCPVA
YQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPIQSNETSNGYFLERSH
SARMTLAKACELCPEEEPDDPDAPDEHESSPPEDAPLYPHSPGSQYQQNNHVHGQPYTGP
AAHHMNNPQRTGQRAQENYEGSEEVSPPQTKD
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctccggtaggagggaatgatagccagggccaggctcct
gatggacagtcccagcctcccctccagcagaatcagacttcttcacctgattcttccaat
gagaactccccagctaccccgcctgatgagcagggccaagctgatgctccaccccagctt
gaagatgaggagcctgcatttccacacacagacctggcaaagttggatgacatgatcaac
aggcctcgatgggttgttcctgtattgccgaagggggaattagaagttcttctagaagct
gctattgacctaagtaaaaaaggccttgatgtcaaaagtgaagcatgccagcgatttttt
cgagatgggttaacaatatccttcacaaaaatccttacagacgaggcagtgagcggctgg
aagtttgagattcatagatgtattattaacaacactcatcgactagtggaactctgtgtg
gccaagctgtcccaagattggtttccccttcttgaacttcttgccatggccttaaatcct
cactgcaaattccatctatacaatggtactcgtccctcagaaacagttcctgcaggagtc
cagctcgctgaagatgagctttatgcccgtcctcctgacccacgatcaccaaagggttgg
ctagtagaccttatcaacaagtttggcacattaaatggatttcagatcttgcatgatcga
ttcatgagtggatcagcattgaatgttcagatcatagcagctctcatcaagccatttgga
caatgttttgaatttttaacattacatacagtgaagaaatacttccttccaattatagaa
atggttccacagtttttagaaaatttaacagatgatgaactgaaaaaagaagcaaagaat
gaagccaaaaatgatgctctgtcaatgataatcaaatctctaaagaacttagcttcaaga
gttccaggacaagaagaaactgtaaaaaatttagaaatatttaggttaaaaatgatactt
aggttgttacaaatttcctctttcaatggtaaaatgaatgcactaaatgaagttaacaaa
gtaatatccagtgtgtcatactacactcatcgacatggtaatcctgaagaggaagagtgg
ctcacagctgaaagaatggcagaatggatccagcagaacaacattttatcaattgtatta
agagatagtcttcatcaacctcaatatgtagaaaaactagagaaaatcctccggtttgtc
atcaaagagaaagctctcactttgcaggatcttgacaacatttgggctgcacaggcagga
aaacatgaagccattgtaaaaaatgtacatgatctcctcgcaaaattagcttgggatttc
tctcctgaacagcttgatcacctgtttgattgttttaaggcaagttggacgaatgcaagc
aagaaacagcgtgagaaactgcttgagttaattcgtcgccttgcagaggatgacaaggat
ggtgtgatggcacacaaagtgctgaatcttctatggaatttggctcacagtgatgatgtg
ccagttgatatcatggaccaggctcttagtgcccatattaaaatcttagattacagctgt
tcacaggatcgagatacacaaaagatccagtggatagatcgttttatagaagaacttcgc
acaaatgacaaatgggtcattcctgcactgaaacaaattagagaaatttgcagtttgttt
ggtgaagcaccacagaacttgagtcaaactcagcgaagtccccacgtgttttaccgacat
gacttaatcaatcaacttcagcacaatcacgccctagttacactggttgcagaaaacctc
tctgcctatatggaaagcatgaggcagtatgctaaagagcatggtgaatatgatcctcaa
actgtgagaccaggaagccgatacagtcacgtgcaggaagtacaggagcgacttaacttc
ttacgatttttattgaaggatggtcagctgtggctctgtgcccctcaggcgaagcaaata
tggaagtgtttagctgaaaatgcggtttatctttgtgatcgcgaagcctgttttaaatgg
tattccaaactaatgggggatgaaccagacttagaccctgacattaataaggacttcttt
gaaaataatgtgcttcagctggatccttccctattaacagaaaatggaatgaaatgtttt
gaacgtttcttcaaagctgtgaactgtcgagaaggaaagctagtagcaaagagacgagcc
tatatgatggatgatctggaattaataggactagactacctttggagggttgtgattcag
ggaaatgatgacattgcaaacagagcaatagaccttcttaaggagatctatactaatctt
ggcccaaggttacaagttaatcaggtagtgattcatgaagacttcattcagtcctgtttc
gatcgtctaaaagcctcctatgatactttatgtgtgttggatggagataaagacagtatc
aattgtgcaagacaagaagcaataaggatggtgagagtgttgactgttttaagagagtat
ataaatgaatgtgacagtgattaccacgaagagagaactattctacctatgtcaagagct
ttccgtggtaaacatatcacacttgtagttcgttttccaaaccaaggccggcaggtggaa
gatttggatatttggtctcacacaaacgacacaattggccaagtgcggcgttgcatcctc
aatcgcattaaagccaacagtgcacacacaaaagtagagctgttcattgggggtgagctg
gtagaccctgcagatgacagaaaattaattgggcagctgaatctcaaagataaaacgcta
attacagctaagcttacacagataaattctaatatgccctcaagtccagatagttcttct
gactcttcaactggttctccgggcaaccatggcaatcactatagtgatggtccaaatcca
gaagttgaaagctgtttgcctggagtgatcatgtcactgcatcctcgatacatctctttt
ctttggcaagttgcagacttgggcagtagtctaaatatgccacctcttagagatggagct
cgtgttcttatgaagctcatgccaccagataacactacagtcgagaaactaagagcaatt
tgtttagatcatgcaaagcttggggaaagcagccttagtccatccctagattctctattc
tttggtccttctgcctcacaagtgctgtacctaacagaggtagtttatgccttgttaatg
cctgccagtgcacctctgggagaagatgccagtgatttccaatacaacttcttgaaaagt
ggtggtttgcctcttgtgttgagcatgctgaccagaaataacttcctgccaaatgcagat
atggaaactcgaaggggtgcctaccttaatgctctaaaaatagccaaattattgctaaca
gcaattggatatggccatgttcgagctgtggcagaagcttgtcagccagttgtggaaggc
acaagtacaatttcaccgataaaccaggctacgcatgaccaggcagtggtgctacaaaat
gccctacaaaacattcctaatccaacttcagaatgcatgctgagaaatgtagcaatacgt
cttgcacagcaaatatctgatgaggcttcaaaatacatccctgacatctgtgttatcagg
gcagtacaaaaaattgtttgggcatcaggttgtgggtcagttcagctggttttcagctca
aatgaggaaattagtaaaatctatgaaaagacaaatgcaggaaatgaaccagacatggaa
gatgaacaagtttgctgtgaagcactggaggtgatgaccctgtgttttgctttgattcca
acggcactggatgcactcagtaaagagaaggcatggcagacgtttatcattgatttacta
ttgcactgtcacagcaaaaccgttcgtcagatggcacaggagcaattctttttaatggct
accaggtgttgcatgggacagagacctctccttttcttcattaccctgctgtttactgtt
ctagggagcactgcaagagagagagctaagcattctggagactacttcaccctcttaaga
catcttcttaactatgcttacaacagtaatattaatgtacccaatgctgaagttcttctc
aataatgaaattgactggcttaagaggattagggatgaagtaaaaagaacaggggagaca
ggtgttgaagaaactatcttagagggtcaccttggagtaacaaaagagttgttagcattc
cagacacctgagaagaaataccatattggttgtgaaaaaggaggtgctaatctcattaaa
gagttgatagatgatttcatctttccagcatccaatgtttatctacaatacatgagaaat
ggagaattgcctgctgagcaggccataccagtctgtagttcaccagctactattaatgct
ggctttgagctcctagttgcactagcagttggatgtgtgcgaaatctcaaacagatagta
gacacgttgactgaaatgtattacataggtacagcaatcactacctgtgaagcgctcaca
gaatgggaatatctgccacctgttgggcctcgaccgccaaagggatttgtgggactgaaa
aatgctggtgccacttgttacatgaattctgtcattcagcagctgtacatgattccagcc
atcaggaatgggattcttgcaattgaaggcacgggcagtgatgtagatgatgatatgtct
ggggatgaaaagcaggacaacgagagcaatgttgacccacgagatgatgtgtttggttat
ccacatcagtatgaagacaaaccagcactgagcaaaactgaagacagaaaagagtacaat
attggtgttttgaggcatctccaagtaatttttggtcatttagcagcttccaggctacag
tactatgtaccaagaggattttggaaacagtttagactttggggtgaacctgtaaatcta
cgtgaacaacacgatgctttagaattttttaattccttggtggacagcttagatgaagct
ttaaaagctttgggccatccagcaatgttaagtaaagttttaggagggtcctttgctgat
cagaagatttgtcaaggatgcccacatcggtatgaatgtgaggaatccttcacaactctg
aatgtagatataaggaatcaccaaaaccttctcgattctttggaacagtatgtcaaagga
gatttattggaaggtgcaaatgcatatcattgtgaaaaatgcaacaaaaaggtggacaca
gtgaaacgcttgttgattaagaagttgcctccagttcttgcaatccagttgaaacgattt
gattatgactgggaaagggaatgtgcaatcaaattcaatgattattttgaatttccacga
gaactggacatggaaccttacacggtggcaggtgtagcaaaattggaaggggatgatgtg
aatcctgaaaatcagataatacaaaatgagcagtcagaaaatgaacactctgggagcaca
aagtacagacttgtgggtgtacttgtgcacagcggccaggccagcggtggacattactac
tcttacattatccagaggaatggtggagacggtgagaagaatcggtggtacaaatttgat
gatggagatgtgacagagtgtaaaatggatgatgatgaagaaatgaaaaaccagtgtttt
gggggagagtacatgggcgaagtgtttgaccacatgatgaagcgaatgtcctacaggcgc
cagaagaggtggtggaatgcttacattcttttttatgaacgcatggacacgatagacaaa
gacaatgaactaataaaatatatttcagaaatcgctatcaccactaaaccccaccagatt
aaaatgccctcagccattgagcgaagcgtgcggaagcagaacgtgcagttcatgcacaat
cggatgcagtacagcctggaatatttccagttcataaagaagttgcttacttgtaatagt
gtctacctaaatcctcctccaggacaagatcatctgttgcctgaagcagaagaaataact
atgattagtattcagcttgctgctagatttctcttcaccacaggatttcatacaaagaaa
atagtccgtggccctgctagtgattggtatgatgccctgtgcatcctgctccgtcacagc
aagaatgtacgcttttggtttgcacacaacgtcctttttaatgtttcaaaccgcttctct
gagtatctcctggaatgccccagtgcagaagtgaggggtgcatttgcaaaacttatagta
tttattgcacatttttcattgcaagatggaccatgtcaatcaccttttgcctctcctgga
ccttccagtcaggcttacgataacttaagtttaagtgatcacttactgagggcggtacta
aatcttctaagaagggaagtatccgaacacgggcgccacttgcagcagtatttcaatctg
tttgtgatgtatgccaatctaggtgtagcagagaagacacaacttctgaaactaaatgtt
cctgcaaccttcatgctggtggctctggatgaaggtccaggccctccaattaaataccag
tatgctgagctggggaagctgtacactgttgtgtcacaactgatccgctgttgcaatgtc
tcatcacggatgcagtcttctatcaatggtaatcccccacttgccaacccttacggtgat
cctaatttatctcagcctataatggcacttcagcagaacgtagcagacattctgtttgtg
agaactagttatgtaaagaaaattattgaagattgcagcaactctgaggagaccatcaag
ttgcttcgtttctgctgttgggagaatcctcaattctcttccacagtcctcagtgagcta
ctttggcaggttgcatattcatatacatacgagcttcgaccttatttggatctgcttctg
caaatcctgttaattgaggactcctggcaaacgcacaggattcacaatgcacttaaggga
atcccggatgacagggatggactcttcgacaccattcagcgctcgaagaatcattatcag
aaaagagcttaccagtgtataaagtgcatggtagctctcttcagcaactgccctgtagct
taccagatccttcagagcaatggcgatttgaagagaaaatggacctgggcagtggaatgg
cttggagacgagctggagcgtagaccatacactggcaatccccaatacacctacaataat
tggtctccaccaatacagagcaatgagacatcaaatggctacttcctagagaggtcacac
agtgctagaatgactcttgcaaaggcttgtgaactctgcccagaggaggaaccagatgat
cctgatgccccagatgaacatgagtcttctccacctgaagatgcccctctgtatccccat
tcacctggttcccagtatcaacagaataaccacgtgcatggacagccatatacgggcccg
gcagcacatcatatgaacaaccctcagcgaactggccaacgagcacaagaaaactacgaa
ggcagtgaagaagtttccccgcctcagacaaaagattag
DBGET
integrated database retrieval system
