Corvus cornix (hooded crow): 104687775
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Entry
104687775 CDS
T03546
Symbol
SCUBE2
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 2
KO
K24706
signal peptide, CUB and EGF-like domain-containing protein 2
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104687775 (SCUBE2)
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Gene cluster
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
EGF_CA
Ephrin_rec_like
EGF_3
CUB
EGF
Plasmod_Pvs28
hEGF
Motif
Other DBs
NCBI-GeneID:
104687775
NCBI-ProteinID:
XP_039408879
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Position
5:complement(52385568..52425195)
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AA seq
1108 aa
AA seq
DB search
MRLERAACVRAATGSSLGPVSAAGDGSRAAGSPGSGTAAGGTRSLRVGYSRSCGGQRLRG
TPVFGALRRWASAGAAAGASTGADGAVRVPGAPTAPGAAGQGRAGEGAARPALAAPRPLS
VRGGPGAPDTPSAAASSRPAAAAAAAPSMGSGGRRGATGARALPLLLLLLPAPAGPAALP
LPDVDECALGLDDCHPDAICQNTPKLYKCMCKVGYTGEGKKCEDIDECDNDFNGGCVHEC
FNIPGNYRCTCYDGFMLAHDGHNCLDTDECMFNNGGCQHVCVNTVGSYECRCKEGFFLSD
NQHTCIHRSEEGMSCMNKDHGCAHICRETPKGGVACECRPGFELSKNQRSCILTCNHGNG
GCQHTCDDADDGPVCGCHPKYVMHVDGKTCLEREEAAVDISEGNTTAAADVDKRVKRRLL
METCAVNNGGCDRTCKDTSTGVHCSCPVGFTLQFDGKTCKDIDECQSNNGGCDHFCKNTV
GSFDCSCRKGFKLLTDEKSCQDIDECSFERACDHTCINHPGTFECTCNKGYALYGFTHCG
DINECSINNGGCQQLCVNTLGDYECLCHSNYKLHWNKKDCVETKGALSDNVSPKVLLHCI
KSGGSDRCFLSCSPDVQVFSGAQDAYTLTCGRSSQLKKKQQNANASSWLDASAIKISVTF
KLNEGKCSLKKTEMFQEGLEQMIPERQNSVMESFHYVNLTCSSGKKAHGALSRLTATREI
FITADFELETSRKEVTDTCDVRCARKKTEKRFRKTIRTLRKTVSRDQFRIRVSGMDHEVA
RKALKPSEPQQSCGVGQVHPGSRCDQCSPGEYSPDGFKPCLPCPLGTYQPEAGRVSCFPC
GGGLTTRHSGASLFQDCETKVQCSPGHFYNTTTHRCIRCAIGTYQPEFGQNYCISCPGNT
TTDFDGSTNITQCKNRQCGGELGDYTGYIESPNYPGDYPANTECTWNINPPPKRRILIVV
PEIFLPIEDECGDYLVMRKSSSSNSVTTYETCQTYERPIAFTSRSKKLWIQFKSNEGNSA
KGFQVPYVTYDEDYQELIEDIVRDGRLYASENHQEILKDKKLIKALFDVLAHPQNYFKYT
AQESREMFPRSFIRLLRSKVSRFLRPYK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggagcgagccgcgtgtgttcgggctgcgacaggctcctcgctcgggcctgtc
tctgcggcgggcgatggttcccgggccgcgggcagccccggctcgggcacagctgccggg
ggcacccgcagcctgcgtgtgggctattcccgctcctgcggggggcagcggctccgcggg
acacctgtgtttggggcgctgcgcaggtgggcgagcgccggggcggctgccggggcttcc
acgggcgcggatggggcggttcgcgtgccgggtgcgcccaccgcgcccggggcagcgggg
cagggccgggcaggggagggggcggcccgcccagccctcgccgccccgcgcccgctgtca
gtgcgaggcgggccgggcgccccagacactccctccgccgccgcctcctcccgcccggcg
gcggcagcggcagcagcgccatcgatggggtccggcggccgccgcggcgcgacgggggcg
agggcgctgccgctgctgctcctgctgctgcccgcgccggccggccccgccgcgctgccc
ctgcccgatgtggatgagtgtgccctggggctggacgactgccacccagatgctatttgt
cagaacaccccgaagctgtacaagtgcatgtgcaaagtgggctacactggcgaagggaag
aaatgtgaagacattgatgaatgtgacaatgacttcaatgggggctgtgtccacgagtgt
ttcaacattccagggaattaccgctgtacttgctacgatggctttatgttggctcacgat
ggccacaactgcctggacacagacgagtgcatgttcaacaacggtggctgccagcacgtt
tgtgtcaacaccgtggggagctacgagtgccgctgcaaggaaggtttcttcctcagcgac
aaccagcatacctgcatccaccgctctgaagaaggcatgagctgcatgaacaaagatcat
ggctgtgcccacatctgcagagaaacgcccaaaggaggagttgcctgtgaatgccgacca
ggatttgagctgtccaagaaccagaggagctgcattttgacatgtaaccacgggaacggg
ggctgccagcacacgtgtgatgatgctgatgatgggcctgtttgtgggtgtcaccccaag
tacgtcatgcacgtggatgggaaaacctgcctggagagggaagaggctgctgttgacatt
tctgagggaaacactacagcagcagctgatgtggacaagagagtgaagcgacggttgctt
atggaaacgtgtgcagtgaacaacggcggctgcgatcgcacctgtaaggacacatccacc
ggcgtccactgcagctgtcccgttggattcacgctccagtttgatggcaagacatgcaaa
gatattgatgaatgccagtccaataatggaggctgtgatcatttctgtaaaaacactgtt
ggcagttttgattgcagctgcagaaaaggatttaaattattaacagatgagaagtcctgt
caagacattgacgaatgctccttcgagcgggcgtgcgaccacacgtgcatcaatcacccc
ggcaccttcgagtgcacttgtaacaaaggctatgccctgtatggcttcacacactgtgga
gatattaatgaatgtagcatcaacaatggtggttgccagcagctgtgtgtgaacactctg
ggagactatgaatgcctgtgtcactctaactacaagctgcactggaacaaaaaggactgt
gttgagacaaaaggtgccttgtctgataatgtgtcacccaaggtattgctgcactgcatt
aagagtggtgggagtgatagatgctttttgagctgctctccggatgtccaggtattctct
ggagcacaggatgcctacaccctcacctgtggcaggtcctctcagcttaagaaaaaacag
caaaatgcaaatgcttccagctggctggatgcttcagccatcaagataagcgtaaccttt
aaattaaatgaaggaaaatgtagtttgaaaaagactgagatgtttcaagaaggtctggag
cagatgataccagagagacaaaattcagtaatggagagcttccactatgtaaacctaacg
tgcagctctggcaagaaagctcatggagccctcagtagactgacagcgactagagagatt
tttatcactgcagactttgagcttgaaacaagccggaaggaggtgacagacacgtgtgac
gtgcgctgtgcccggaagaagacggaaaagaggttccgtaaaaccatccgaaccttacgg
aagacggtcagcagggaccagttccgcatccgcgtctctggcatggaccacgaggtggcc
aggaaggctctcaagccatcggagccacagcagtcctgtggtgtgggacaggtgcatcca
gggagcagatgtgatcagtgctccccaggggaatattctcctgatggcttcaagccctgt
ctgccatgtccccttggaacatatcagcctgaagctgggagagtatcctgctttccctgt
ggaggaggtctaacaacaaggcatagcggggcatccttgtttcaggactgtgagaccaaa
gttcagtgttctcctggccatttttacaacaccacaactcaccgatgtattcgctgcgca
attgggacataccagcctgagtttggacaaaattactgcatttcctgccctggaaacacc
actactgatttcgatgggtcaacaaacataacacagtgcaaaaacaggcagtgtggaggg
gaactgggagattacactggatatattgaatcacccaactatcctggggactaccctgca
aacacggagtgcacttggaatatcaacccaccaccgaagcgccgcatcctgattgtggtt
ccagaaatattcctgcccatagaagatgagtgtggagactacctggtgatgagaaaaagc
tcttcttccaactcggtgaccacatatgagacctgccagacctacgagcgccccatagct
ttcacttccaggtctaagaagctgtggatccagttcaagtcgaatgaagggaacagtgcc
aaaggattccaagttccttatgtaacctatgacgaggattaccaagaactcatagaagac
attgttcgggatggcagactttatgcatctgaaaatcatcaagaaatacttaaggacaag
aagctgataaaagcattgtttgacgtgttggcgcatccacagaactacttcaagtacaca
gcccaggagtcaagagagatgttcccaagatccttcattcggctgctgcgctccaaagtt
tccagatttttgaggccttacaaatag
DBGET
integrated database retrieval system
