Corvus cornix (hooded crow): 104688830
Help
Entry
104688830 CDS
T03546
Symbol
SETD1B
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00310
Lysine degradation
ccw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104688830 (SETD1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104688830 (SETD1B)
Enzymes [BR:
ccw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
104688830 (SETD1B)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104688830 (SETD1B)
HMT complexes
COMPASS/SET1 complex
104688830 (SETD1B)
COMPASS/SET1 complex (yeast)
104688830 (SETD1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
104688830
NCBI-ProteinID:
XP_039416877
LinkDB
All DBs
Position
15:3224292..3272047
Genome browser
AA seq
2004 aa
AA seq
DB search
MSFRETKAGEKAKHPEDHGKKQSSSWINGMENSTQASTSVEKRNHHWRSYKLIIDPALKK
GQHKLYRYDGQHFSMPNSGIAPVDCVRDPRIGRIWTKTKELELSVPKFKIDEFYVGPVPP
KQVTFAKLNDNIRENFLADMCKKYGEVEEVEILYNPKNKKHLGIAKVVFATVKGAREAVQ
HLHNTSVMGNIIHVELDTKGETRMRFYELLVSGLYTPQTLPVGTEQDVSPTGNEALQLTD
SLKRMKDSSLSSAGSSVTPNSSTPFSHDTAYSSCRQDTPNSYSQFTPQSQGTPHTPRLGT
PFSQDSTYSSRQTTPVYHFGQDSGYKPRRHETKFTDAYNRRPGHHYVHNSAGVFRGTEHQ
FSTFKSHQQEPVQFSHTPPLSHSSSSSYKSAFSPYQAPAVFPQSDEQPFPQTSRETEYRR
PAPPPTEMVVESSAAPSIDFVPVKEKPEEPPPLPDSNSVPEPSTASFSQTPERSETPGTP
TMESEMQHNSLDSRIEMLLKEQRTKLPFLNEHDSDNEVRMEGSPISSSSSQLSPIPTYGS
NSQPGFRGQTPSSRPSSTGLEDISPTPLPDSDDDEPIPGTASLSQNSRGTSEASMTPIDQ
LSRTSKTEILEAKEMVPGDQTPTSEKMDEGQHSSGEDMEISDDETNPAPITSAECAKTIV
VNSSVSNTAVMAPSIPPLPPPGFPPLPPPPPPQPGFPMPPPLPPPPPPTHPAVTVPPPPL
PAPPGVPPPHILPPLPPFHPGMFPVMQVDMISVLGNQWGGMPMSFQMQTQMLSRMMQAQN
TYQYPPFITGRMQFVNLPPYRPFSMGAALARGQQWPPLPKFDPSVPPPGYEPKKEDPHKA
TVDGVLLVIVKELKAIMKRDLNRKMVEVVAFRAFDDWWDKKERLAKASLTPVKSGGELEE
KPKPKDRIASCLLENWNKGEGLGYEAIGLGIGLRGAIRLPSFKVKRKEPPEAASAGDQKR
IRPSTSVDDEDEESERDRDASDTTSDLSKKDAEAVGLRRRPARPLELDSEGEEGDETSGK
EEESSSEKEEEQEEEGGLVKAAPGKEEEEDEEDEDDEDEDDDEDEDEDDEEETGIDTSDK
EEEQDSEEDVASPSSSKAEVESSDESEDSSEFESSSDSDDEDEEDDDDEDEEEEEEEEVA
EDQGREAMVAEPEHEPAGHELPEDERETILDLYPVDDYMDATGLGLAEPALAVKDEGSEE
IKAEESECGQVPGASLAAETLKHLVMERDQETKLALSPICRPEEESEPTSMLEAEVQEGP
KPASQDEEATLCISAPVGVFGEPLPSKSSFFGKSEDSTLEGRVKAKPPSAAEEDERLPRT
PGREVMIHSETETLLLPAHKVPSSMLPLPSTPGKEESLVPPEKFPEQLMVTKTSVEEEIP
RTPGRDILAKSSHPLAKSQSTDTVPATPGSDAPLTGSSLTLSSPQVPGSPFSYPSQSPGI
NSGIPRTPGRDFNFTPTFPEAGATIPCLLSGKKQSEDELEEKPSKEPLGASLTISMNSVP
SPIPFASPPQADFHMDMGLPPDEPIPVAALPCMHGDGRMPIEECKAEVKPGLLSPELPPG
ASILPPPPPPSVLPKRRPGRPRRSPPSVLSLDVYPGKTIEPPPVPVALVEGAMGKELLSG
HPDAYYGLKDPEAVTLDFRNDGFHEKIAAETVAEKLPFKELENQWNEDFKEEEAHAKPKR
QWRRQKKTSEELPVIPSPEYSPPRPQFRPRSEFEEMTILYDIWNGGIDEEDIKFMCITYD
RLLQQDNGMDWLNDTLWVFHPSTSFSTPKKKKRDDGMREHVTGCARSEGYYKIDKKDKLK
YLNNSRAFAEEPPADTQGMSIPAQPHASTRAGSERRSEQRRLLSSFTGSCDSDLLKFNQL
KFRKKKLKFCKSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGIGSSY
MFRVDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSKQHINVNEEITYD
YKFPIEDVKIPCLCGSENCRGTLN
NT seq
6015 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccgagagaccaaggcgggggaaaaagccaagcaccctgaagatcatggcaaa
aagcagagttcaagttggatcaacggaatggagaacagcacgcaagccagcacttctgtc
gagaaaagaaatcaccattggagaagttacaagttgattattgacccggctctgaaaaaa
ggacagcacaaactctaccgttacgatgggcaacatttcagcatgcctaactcgggaatc
gctcctgtggattgtgtcagggatcccagaatagggcgaatatggaccaaaactaaggag
ttggagttgtctgtccccaaattcaagattgatgaattttacgtggggccagtgcctccc
aagcaggtcacctttgccaagctgaacgacaacatccgtgaaaactttttggccgacatg
tgcaagaaatacggcgaagtggaagaggtggagattctctacaaccccaagaacaagaag
cacctgggcattgccaaagtcgtctttgccactgtcaagggtgcccgggaggctgtgcag
caccttcacaacacctctgtcatgggcaacatcatccacgtggagctggatacaaaaggt
gaaacccgcatgagattctatgaactgctcgttagtggtctttacactcctcagaccctc
cctgtaggcaccgaacaggacgtgtccccgactgggaacgaagctctccagttgacggat
tccctgaagcgcatgaaggacagttccctttcttccgcgggatcctccgttaccccaaac
agcagcacgcccttttcccatgacacagcctattccagctgtcggcaagacaccccaaac
tcgtacagccaattcaccccgcagtcccaaggaacgccccacaccccacgcttggggacg
ccgttctcccaggattccacctattccagccgtcagacaacacccgtgtaccattttggg
caggacagtgggtacaaaccccggaggcacgagacgaaatttacggatgcgtacaaccgt
cgcccgggacaccactacgtgcacaactcggcgggggtgttccgaggcacggagcatcag
tttagtacattcaaatcccatcagcaggagccagttcagttctctcacactcctcccctg
agccactctagttcttcgagctataaatctgccttctctccctaccaagcaccagctgta
tttccccaatctgatgagcagccgtttccccaaacttccagggagacagagtaccggaga
cctgctccacctcccaccgagatggttgtggaaagcagtgctgccccaagcatcgatttt
gtcccagtgaaggagaagccggaggagcctccgcccttgcccgactcgaactctgttcct
gaaccgagcacagcatccttctctcagactccagagaggagtgagacccctggcaccccc
accatggagtctgaaatgcaacataacagtttggactcaaggattgagatgctcttaaaa
gagcagagaacaaagttaccctttcttaatgagcatgactcggataatgaggtccgaatg
gaaggtagccctatttcctcctcttcttcccagctctcccccatcccaacatatggttcg
aactctcagcccggtttcaggggtcagacgccttcctcgcgcccttccagcacaggcttg
gaggacatcagccccacaccgttacctgactctgatgatgatgagcccatccctgggaca
gcttctctgagtcagaattcccgggggacatcagaggccagcatgactcccatcgatcag
ctgagcaggacctccaaaactgaaatcttggaggctaaagaaatggtgcctggtgatcag
actccaacatcagaaaaaatggacgagggtcagcattcctcaggggaggacatggaaatc
tctgacgacgagaccaaccctgcgcccatcaccagcgcggaatgtgccaaaaccattgtg
gtgaactcctccgtcagcaacacggccgtgatggccccgtcgatccccccgctgccacca
ccgggattccctcctcttcctcctccgccacctccacagccgggcttcccgatgcctccg
ccgctgcctccgccgccgccgcccacccacccggccgtcaccgtccccccgccgccgctg
cccgccccgcccggggtccctccgccccacatcctgcccccgctccccccgttccatcct
ggcatgttccccgtcatgcaggtggatatgatcagtgtcttgggcaaccagtggggtggc
atgccaatgtcgttccagatgcaaactcagatgctgagccgcatgatgcaggcacagaac
acgtaccagtatcctcctttcataacaggccggatgcagtttgtgaatcttcctccctac
cgccctttctcgatgggagccgctcttgcccgcgggcagcagtggccaccactgcccaag
tttgacccctcggttccacccccgggttatgagccgaagaaggaggatccccacaaagcc
actgtggatggagtcctcctggtcatagtgaaggaactaaaggccatcatgaaaagggac
ctgaaccgcaagatggtcgaagtggtggcattccgggcatttgatgactggtgggacaag
aaggaacgtctggcaaaggcatctctcactccagtgaagtctggaggagaattggaggaa
aaaccaaagccgaaggatcgaatcgcctcttgtcttttggagaactggaacaaaggagaa
gggctgggatatgaggcaatcggcttgggcattgggttacgaggggccatccggctgcca
tccttcaaggtgaaaagaaaggagccacctgaagctgcctcagcaggagatcagaagaga
atccggccttctacttctgtggatgatgaagatgaagagtcggagagggacagggatgct
tctgatacaacatctgacctgtcaaagaaggatgcagaggcagtggggctgcgacggcga
ccagcaaggccattggagctcgacagcgagggagaagagggagatgagacatcagggaaa
gaagaggagtcctcctcagagaaggaagaggagcaggaagaagagggaggcttggtgaaa
gcagcacctggcaaggaggaagaggaggatgaggaggatgaagatgatgaggatgaagat
gatgatgaagacgaggatgaagatgatgaggaggagacgggcatagacacaagtgacaag
gaggaggagcaggactccgaggaggatgtagcaagtccctcgtcttccaaggctgaagtt
gaatcatctgatgaaagtgaggactcctctgaattcgaatcaagttctgactcggatgat
gaagatgaggaggatgatgatgatgaagatgaggaggaggaagaggaggaagaggtggct
gaagatcaaggcagagaagccatggttgctgagccagagcatgaacctgctggtcatgag
cttcctgaggatgagagggagactattttggacctgtatcctgtggatgactacatggat
gcaacaggcttgggacttgccgagccagctttggcagtgaaagatgaaggcagtgaagaa
atcaaggcagaggaaagtgagtgtggccaagtcccgggggcatctcttgctgctgaaact
ctgaaacacttggttatggaaagagaccaggagacaaaacttgcactctctcccatctgt
aggccagaggaagagtccgaacccacttccatgctggaggcagaggtacaggaaggtcca
aagcctgcatctcaagatgaggaggcaacgctctgtatctctgctccagtgggagtcttt
ggagaacctctgcccagcaaaagcagtttctttggcaagtctgaggacagcactttggaa
ggccgagttaaagcaaagccgccatcggcagcggaggaggacgagcggctgcctcgtacg
cctggacgggaggtgatgatccactcggagactgagactcttctgcttccagcccacaag
gtgccatcctccatgcttcccctgccatcaactcctggcaaggaagaatctttagtccct
ccagaaaagttccctgaacaattaatggtgaccaaaacatccgtggaagaagagattcct
aggactcccgggcgggacattttggccaagtcttcacaccccctcgcgaagtcacagagc
acggacactgttccagccacgccaggaagtgatgctccccttacaggaagtagcttgacc
ctcagttcccctcaagtcccagggagccccttttcctacccatcccaatctcctggcatt
aacagtggcattcctcggactcctgggagagatttcaatttcacccctactttcccagag
gctggtgctaccattccttgccttctgtctggcaagaaacagtcagaggatgaactagag
gagaaaccctctaaagagcctcttggtgcttcccttacgatcagcatgaacagtgttcct
tcccctatcccctttgccagccccccgcaagcagatttccacatggacatgggtttgcca
cctgatgagccaatacctgtagcagccctgccgtgcatgcatggagatggaagaatgccc
atcgaggaatgcaaggcagaagtgaaacctggtttgctctccccagaactaccccctggg
gcttctattcttcctcccccaccaccaccttctgttcttcccaaaaggaggccgggtcgg
ccgaggcggtccccaccttctgtcctctcgctggatgtgtacccaggcaaaaccatagaa
cctcctcccgtgccagtggccttggtggaaggtgctatgggcaaagagctgttgagtgga
catcctgatgcctactatggactgaaagaccctgaagccgtcaccctggacttcaggaat
gatggtttccatgagaaaatagcagctgagacagttgcagagaaactgccattcaaggaa
ctggagaaccagtggaatgaagacttcaaggaagaagaagctcacgcaaaacctaagaga
cagtggcgaaggcagaagaagacatctgaggagctgccagtgatcccttcccccgagtat
tccccgccccggccgcagttcaggccgcgctccgagtttgaggagatgaccattttgtat
gatatctggaacggaggcatagatgaggaggatatcaaattcatgtgtatcacatacgac
cgcttgttacagcaggacaatggtatggactggctcaatgacaccctgtgggttttccat
ccttctaccagcttttctacccccaagaagaagaagcgggatgacgggatgcgggagcac
gtgacgggctgtgcacggagcgaaggctattacaaaattgataagaaggacaaactcaaa
tacctcaacaatagccgagcttttgcagaggagcctccagctgacacacagggtatgagc
atccctgcccaacctcatgcttccacccgggctggttctgagaggcgatcagagcaacgc
aggctcctctcctccttcactggtagctgtgacagtgacctgctcaagttcaaccagctc
aagttccggaagaaaaagctaaaattctgcaagagtcacattcacgactggggccttttt
gctatggagcccattgcagctgatgagatggtgattgaatacgtgggtcagaacatcagg
caggtcattgctgacatgcgtgagaagcgatacgaggatgaaggcatcggcagcagttac
atgttcagagttgaccacgacaccatcatcgatgccaccaaatgcgggaacttcgccagg
tttatcaatcacagctgcaatccaaattgttatgctaaagtgatcacggtggagtctcag
aagaagatcgttatctactccaagcagcacatcaatgtgaacgaggaaattacctacgac
tacaagtttccaattgaggatgtaaaaatcccgtgtctctgtggctctgagaactgcagg
ggaaccctgaactga
DBGET
integrated database retrieval system
