Corvus cornix (hooded crow): 104692181
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Entry
104692181 CDS
T03546
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03265
Virion - Ebolavirus and Lyssavirus
ccw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
104692181 (NCAM1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104692181 (NCAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104692181 (NCAM1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccw04515
]
104692181 (NCAM1)
04090 CD molecules [BR:
ccw04090
]
104692181 (NCAM1)
00536 Glycosaminoglycan binding proteins [BR:
ccw00536
]
104692181 (NCAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccw00537
]
104692181 (NCAM1)
Membrane trafficking [BR:
ccw04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
104692181 (NCAM1)
Cell adhesion molecules [BR:
ccw04515
]
Immunoglobulin superfamily
NCAM1/2
104692181 (NCAM1)
CD molecules [BR:
ccw04090
]
Proteins
104692181 (NCAM1)
Glycosaminoglycan binding proteins [BR:
ccw00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
104692181 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccw00537
]
Others
104692181 (NCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
C1-set
V-set_CD47
Receptor_2B4
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
104692181
NCBI-ProteinID:
XP_039420922
LinkDB
All DBs
Position
24:complement(1283519..1369597)
Genome browser
AA seq
1136 aa
AA seq
DB search
MLLLLAVLPCAFVLLRAAASLQVDIVPSQGEISVGESKFFLCQVAGEAKFKDISWFSPNG
ERLTPNQQRISVVRNDDFSSTLTIYNANIDDAGIYKCVVSSLEEGDSEATVNVKIFQKLM
FKNAPTPQEFKEGDDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGI
KKTDEGTYRCEGRILARGEINFKDIQVIVNVPPSVRARQSTMNATANLSQSVTLACDADG
FPEPTVTWTKDGEPVEEVEDEDKYSFNYDGSELVIQKVDKSDEAEYICIAENKAGEADAT
IHLKVFAKPKITYVENKTAMELEDQITLTCEASGDPIPSITWRTSTRNISNEEKASWTRP
EKQETLDGRIIVRSHARVSSLTLKEIQYTDAGEYVCTASNTIGQDSQAMYLEVQYAPKLQ
GPVAVYTWEGNQVNITCEVFAYPSAVISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPD
SENDFGNYNCTAVNRIGQESSEFILVQADTPSSPSIGRVEPYSSSAQVEFDEPEATGGVP
ILRYKAEWRALGEVEWHSRFYDAKEANVEGMVTITGLKPETTYAVRLSAVNGKGVGELSL
PAEFKTQPVRIPHPPPPPDLSAQPHGPHLGTEGEPSAPKLEGHIGEDGNSIKVNVIKQDD
GGSPIRHYLIKYKAKHSSEWKPEIRLPSGSDHVMLKSLDWNADYEVYVIAENQQGKSKPA
HYAFRTSAQPTVIPASTSPASGLGTAAIIGILVVVFVALLVAVDVTCYFLNKCGLLMCIA
VNLCGKSGPGAKGKDMEEGKAAFSKDESKEPIVEVRTEEERTPNHDGGKHTEPNETTPLT
EPEHPADTAATVEDMLPSVTTGTTNSDTITETFATAQNSPTSETTTLTSSIAPPATATPD
ANATAPGQATPAKGAAAASAASPPSSTPKVAPLVDLSDTPSSAPATSNLSSSVLPGQAVL
SPSTAVADAAKAGNKPAAPSPANLTSPPAPSEPKQEVAKSPEKEPVQPSTVKSPAETPKN
PSNVKSEAASGSAANPSQNEDFKMDEGTFKPPDIDLAKDVFAALGTATPPAASGAGGQAP
EPAAAAADSSAPAAPASTEKMPAEDKGAVQDRKSPPAEVKTVPNEATQTNENESKA
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgctcgccgtgctgccctgcgccttcgtcctgctgcgagccgcagcctct
ctccaagtggacattgttccaagccagggggagatcagcgttggagaatccaagttcttc
ttatgtcaagtggcaggggaggccaagttcaaggacatctcgtggttctccccgaacggg
gagaggctgaccccgaaccagcagcgcatctcggtggtgcgcaacgatgacttctcctcc
accctcaccatctacaacgccaacatcgacgacgccggcatctacaagtgtgtggtcagc
agcctggaggagggcgactccgaggccaccgtcaacgtcaagattttccaaaagctgatg
ttcaagaacgctcccacccctcaggaattcaaggaaggggacgatgctgtgattgtgtgt
gacgtggtcagctcactgccccccaccatcatctggaagcacaaaggcagggatgtcatc
ctaaaaaaggatgtgcggttcatcgtcctgtccaacaactacctgcagatccggggcatc
aagaagacagatgagggcacctacaggtgtgaggggaggatcctggcccgtggggagatc
aacttcaaagacatccaggtcatcgtgaatgtccctccctccgtgcgtgccaggcagagc
accatgaatgccactgccaacctcagccagtctgtcaccctggcctgtgatgccgacggc
tttcctgagcccaccgtgacgtggacaaaggatggagagcccgtggaggaggtggaggat
gaggacaaatacagcttcaactacgatggctccgagctggtcatccagaaggtggacaag
agcgacgaggccgagtacatctgcatcgctgagaacaaggctggcgaggccgacgccacc
atccacctcaaagtctttgccaaacccaaaatcacctacgtggagaacaagacagccatg
gagctggaggatcagatcacgctgacctgcgaggcgtcaggggaccccatcccctccatc
acctggagaacctccacgcggaacatcagcaacgaggagaaggcttcgtggacccggccc
gagaaacaagagacgctggacgggcggatcatcgtgcgcagccacgcgcgcgtgtcctcg
ctgaccctcaaggagatccagtacacggacgcgggcgagtacgtgtgcaccgccagcaac
accatcggccaggactcgcaggccatgtacctggaagtgcagtatgcccccaagctccag
ggccctgtggccgtgtacacctgggaaggaaaccaagtgaacatcacctgtgaggtgttt
gcctaccccagcgctgtcatctcctggttccgggacgggcagctccttcccagctccaac
tacagcaacatcaagatctacaacaccccctcagcaagttacctggaggtgaccccagac
tcggagaatgactttgggaactacaactgcactgctgtgaaccgcatcgggcaggagtcc
tccgagttcatcctggtgcaggcagacaccccctcgtccccgtccatcggcagagtggag
ccctattccagcagtgcccaggtggagttcgacgagcccgaggccacgggcggggtgccc
atcctcaggtacaaggcagagtggagggccctgggcgaggtcgagtggcactccaggttc
tacgatgccaaggaagccaacgtggaggggatggtgaccatcacggggctgaagcctgag
accacctatgctgtgaggctgtcagcagtcaatggcaagggcgtgggggagctcagcctg
cccgccgagttcaagacacaaccagttcgcatccctcacccacccccaccgccagacctg
tctgcccagcctcatggccctcacctggggacagaaggggaacccagcgcccccaagctg
gaagggcacataggagaggatggaaactccatcaaagtgaacgtcatcaagcaggacgat
ggtggctcccccatcaggcactacctgatcaagtacaaagctaagcactcctcggagtgg
aagccggagatccggctgccgtcgggcagcgaccacgtgatgctgaagtctctggactgg
aacgctgactacgaggtgtacgtgatcgctgagaaccagcagggcaagtccaagccagcc
cactacgccttccgcacctcggcccagcccaccgtcatcccagccagcactagccctgcc
tcaggcctgggcactgctgccatcattggcatcctcgtggtggtcttcgtggcgctgctg
gtggccgtggatgtcacctgctacttcctgaacaagtgtgggctgctcatgtgcatcgcc
gtcaacctgtgcggcaaatccggcccgggggccaagggcaaggacatggaggaggggaaa
gcggccttctcgaaggatgagtccaaggagcccatcgtggaggtgcggacggaggaggag
aggacccccaaccacgatggggggaagcacacggagcccaacgagaccaccccgctgaca
gagccagagcaccccgccgacactgcggccaccgtggaggacatgctgccttctgtcacc
acgggcaccactaactctgacactatcactgaaacctttgccactgcccagaacagcccc
accagcgagaccaccacgctgacctccagcattgccccgccggccacggccactcccgac
gccaacgccacggcccccggccaggccaccccggccaaaggcgcggccgccgcctcggcg
gcatcgccgccctcctccacccccaaagtggcccctcttgttgatctcagcgataccccc
agctctgctccggccaccagtaatttgtcttcaagtgtcctgccggggcaggccgtgctc
agccccagcaccgcggtggccgacgccgccaaagccgggaacaagccggccgcccccagc
cctgccaacctcacgagccctccagctccctcagagcccaagcaggaggtggccaagagc
cccgagaaggagcctgtgcagcccagcacagtgaagagtccagcagagacccccaagaac
ccgagcaacgtgaagagcgaggctgcctcgggcagcgccgccaacccctcgcagaacgag
gactttaaaatggacgaagggaccttcaagccaccagacattgatcttgcaaaggatgtt
tttgcagctcttggcactgctactcctcctgctgccagcggggctggtgggcaagccccc
gagcctgctgctgccgctgcagacagctctgcccccgccgcgcccgcaagcaccgagaaa
atgcccgcagaggacaaaggcgccgtgcaggacaggaagagccctcccgcagaagtgaag
acggtgcccaacgaagccacacaaacaaatgagaacgagagcaaagcatga
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