Corvus cornix (hooded crow): 104692899
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Entry
104692899 CDS
T03546
Symbol
VIRMA
Name
(RefSeq) protein virilizer homolog
KO
K22910
protein virilizer
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104692899 (VIRMA)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
104692899 (VIRMA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIR_N
UL97
Motif
Other DBs
NCBI-GeneID:
104692899
NCBI-ProteinID:
XP_039404470
LinkDB
All DBs
Position
2:complement(130501265..130528304)
Genome browser
AA seq
1827 aa
AA seq
DB search
MAADAATELLFLDTFKHQSAEQSTNIDVVRFPCVVYINEVRVIPPGVRAHTSLPDNRAYG
ETSPHSFQLDLFFNNVSKPSAPVFDRLGSLEYDENTSIIFRPNAKVNTDGLVLRGWYNCL
TLAIYGSVDRVITHERESPPPPPPPPPPPQQQPGLKRNPKHVDGEKEDQFNGSPPRPQPR
GPRTPPGPPPPDDDEDEPMPVSVVGEKEDDVDHREDYFEPISPDRTSIHQESQYSDDGEV
EEDQPEEGEDDDDVDVEEEEDEDDDDDDDDDGHTVESIADEEEEEEEEDDEDEEEGEEEE
EGDGDDGYEQISSDEDVIADLERETFKYPSFDIEYTPEDLASVPPVTYEPFEKELGPLLY
FSCPYKTVFENEVAKIKDQDPEKENSGAVEGSVKLTELLELYQEERGAKWVTALEEIPSL
IVKELSYLLVKDTKQDYITQLVDWTLQALNLQVALKQPIALNVRQLKAGTKLVSSLGECG
TQGITALLQAGVINVLFELLFADHVSSSLKLNAFKALDSVISMTEGMEMFLRGGADVHEK
SGYQKLLELILLDQTVRVVTAGSAILQKCHFYEILSDIKKVVDQLAENTPPLPNHTEPEQ
DQDLAGLERTNQEYENDVEAPMDMDHLLESSNISEGEMEKLVSLLEEIFHLMETAPHTMI
QPPVKSFPTMARITGPPERDDPYPVLFRYLHSHHFLECITLLLSLPVTGAHPGVLQAVRD
ILRFLAQSQKGLLFFISEHEATNLLVRALCQFSDPDQEEGLQSDGANEDTFALWLLHSTQ
TLQCISELFCHFQRCTASEETDHSDLLGTLHNLYLITFNPVGRSAVAHVFSLEKNLQSLI
TLMEYYSKEALGDSKSKKSVAYNYACILVLLVVQSSSDVQMLEQHSAPLLKLCKADENNT
KLQELSKWLEPLKNLRFEINCIPNLIEYIKQNIDSLMTPDGVGLPTALRVLCHIACPPPL
VEGQQKDLKWNLAVIQLFSSEGMDTFIRVLQKLNSILIQPWRLHVNMGTTLHRVTTISMA
RCTLTLLKTMLTELLRGGSFEFKDMRVPAALVSLHMLLCSIPLSGRLDSDEQKIQNDIVD
ILLTFTQGVNEKLTISEETLANNTWSLMLKEVLSSILRIPEGFFSGLILLSELLPLPLPM
QTTQVIEAHDIAVALNTRKLWSMHLHVQAKLIQEIVRSFSGSSCQPIQHMLRRICVQLCD
LASPTALLIMRTVLDLIVEDLQSNTEDKEKQYTGQTTRLLALLDALASHKACKLAILHLI
NGTNKGDEKYAEVFQELLALMRSAGDNVTHQQCAEYVTSLLQSLCDQDIALILPSSSEGS
VSELEQLSNSLPSKELMPLICDCLMETLMNSESSYSCLLTCIRTMMFLTEHDYGFYHLKS
SLRKHSNALYTVLKRVITSFSKDTGELASSFLDFMRQILNSDTLGCCGDDGSLMETDGSH
PGRTLGLTTAELKHLLQNKEETPENLLLDLEKHVMDRSKEDDGLESLLDNIVGVRQMLES
AGDSCPLSDQDVEPTLSAPDSLQNLFNNRTTYVLADVMDDQLKSMWFSPFQAEEIDTDLD
MVKVDLIELSEKGCSDFDLQAELERSFLSEPSSPGRTKTTKGFKLGKHKHETFITSSGKS
EYIEPAKRAHVVPPPRGRGRGGFGQGIRPHDIFRQRKQNTSRPPSMHVDDFVAAESKEVV
APDGIPPAKRPPKVSQKISSRGGFSGNRGGRGAFHSQNRFFTPPASKGNYSRREGARGSS
WSAQSTPRGTYNDSRGGQSNFNRGPLPPLRPLSSAGYRPSPRDRASRGRGGIGPSWTSAN
SSSSGGSRGKFVSGGSGRGRHVRSFTR
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggatgctgccaccgagctgctgttcctggacacgttcaagcatcagagtgcg
gagcaaagtaccaatattgatgtggttcgttttccatgcgtggtttacataaatgaagtc
cgtgtcattcctccaggagtgagagctcacacaagtttgcctgacaacagggcttatgga
gagacgtccccccattcgtttcaactggacttgtttttcaacaatgtcagcaaaccaagt
gcccctgtttttgatcggctgggaagccttgaatatgatgaaaacacttcaattattttc
aggcccaatgcaaaggtcaacacggatggattggttcttagagggtggtacaactgtctg
actttggcaatatatggctcagttgacagggtaataactcatgagagagagtcacctcct
ccaccaccccctccacctccacctccccagcaacagcctggattgaaaagaaatccaaaa
catgttgatggagagaaagaagaccaattcaatggcagtcctccaagaccacaacctagg
ggaccaaggacacctccaggccctcctcctcctgatgatgatgaggatgaacctatgcca
gtgtcagtggttggggaaaaagaagatgatgtggaccatagggaggattactttgagccg
atttctcctgatcgaacatccattcatcaagaaagccagtattctgatgatggagaagta
gaggaagatcaaccagaagaaggggaagatgatgatgatgtggatgttgaggaggaggag
gatgaggatgatgatgatgatgatgatgatgatggtcatacagtagagagtattgctgat
gaggaagaagaggaggaggaggaagatgatgaagatgaagaagagggtgaagaggaggaa
gaaggtgatggagacgatggctatgagcagatttcaagtgatgaagatgtaattgctgat
ctggaacgtgaaacatttaaatatccaagctttgatattgaatatactcctgaggatctg
gcatctgtgcctcctgtgacatatgaaccttttgaaaaggagcttggaccacttttatac
ttcagctgcccttacaagactgtgtttgaaaatgaagttgctaaaataaaggaccaagac
ccagaaaaagaaaattcaggggcagtggaaggctcagttaaattaactgaactgttggaa
ttatatcaagaggaaaggggtgcaaagtgggtcactgcattagaagaaattccaagttta
atagtaaaagaattgagctacctgctggtgaaagacacaaagcaagactatattacccag
ctagtagactggacccttcaagctttaaaccttcaggtggctctcaaacagcccattgct
ttgaacgttcgacaactcaaagctgggacaaaattggtatcttcattaggagaatgtggg
actcaaggaataacggcactcttgcaggcaggagttattaatgtgttgtttgaactgttg
tttgcagatcatgtatcatcctcccttaaacttaatgcttttaaagctttggatagtgtc
attagtatgactgagggaatggaaatgtttctaagaggcggcgcagatgtacatgaaaaa
agtggttatcagaaactcctggaactcatactgttagatcagactgtgcgagttgttaca
gctggttctgcaattctccagaaatgtcacttctacgagattctgtcagacattaaaaag
gtggttgatcagttagcagagaacactcctcctcttcctaaccacacagagccagagcag
gaccaggacttggcaggacttgaaagaaccaaccaagaatatgaaaatgatgtggaggct
cctatggacatggatcatcttttggaatcttctaatataagtgaaggagagatggaaaaa
cttgttagtcttcttgaagagatctttcatttgatggaaactgctcctcatacgatgatt
cagccacctgtgaaatctttcccaaccatggcacgcattacaggccctccagaaagggat
gatccttaccctgtcctgtttagataccttcatagtcaccacttcttggaatgcattact
ttgctgctgtctcttccagtgacaggtgcacatccaggtgtgcttcaagctgtccgagat
atattgcgtttcctggcacagtcacagaagggtcttcttttctttatttctgagcacgaa
gcaacaaacttgttggttagagcactttgtcagttttctgatccagatcaagaggaaggt
ctgcagtcagatggtgccaacgaggatacttttgccctgtggctcctgcattcaacacag
acattacagtgcatttcagaattgttctgccacttccagcgatgcacagccagcgaggag
actgaccactcagatctgttgggaacacttcacaacctttacttgatcacctttaaccct
gtaggaagatctgctgtagctcatgtattcagtctagaaaaaaatctccaaagtcttatt
actttaatggagtactattccaaagaagctttaggagactcaaagtctaagaagtcagtt
gcttataattatgcctgcatccttgttttgctggtggtacagtcttccagtgatgtccaa
atgctggaacagcactcagcacctttgctgaagctttgtaaagcagacgaaaataacacc
aagttgcaagagctcagcaagtggcttgagcctttgaaaaaccttagatttgaaataaat
tgtattccaaatcttattgaatatatcaaacagaatattgacagtttgatgaccccagat
ggagttggtcttcccactgcacttcgtgttctttgtcatattgcatgtccaccgccgctg
gtagaaggtcaacagaaagaccttaaatggaaccttgctgttattcagctcttctcttcc
gagggaatggacaccttcatccgggtgttacagaagctgaacagcatccttattcagcct
tggcgactccatgtcaacatgggcaccacgctgcacagagttactactatttctatggcc
cgctgcacacttactctccttaagacaatgctaacagaactgctgaggggtggatccttt
gaattcaaggacatgcgtgttcctgcagcacttgtttctttacacatgctcctctgctct
attcctctctcaggccgcttagatagcgatgaacaaaaaatccagaatgacattgttgat
atcttactgacttttacacagggtgttaatgaaaaacttaccatttctgaggaaactttg
gcgaacaatacttggtctttaatgctgaaggaagttctctcttcaattttgagaattcct
gaaggctttttctctggacttatactgctttcagaattgttgcctcttccactgccgatg
caaactactcaggtaatagaagcccatgatattgcagtggcactcaacacccggaagctg
tggagtatgcacctccacgtgcaggccaagctgatacaggagatcgttcgatccttctct
ggttcgtcttgccagcccattcagcatatgttgaggcgtatttgtgttcagctgtgtgac
ttggcttcacctactgctctcctcatcatgaggacggtattggatctaattgtagaagac
ctgcaaagcaacacagaagataaagagaaacagtacactggacagaccactcgattgctc
gctttattggatgccctggcttcacataaagcttgtaaattggctattttgcatcttatc
aatggaactaataaaggagatgaaaaatatgcagaggttttccaggagctcttggctttg
atgcgatcagctggggacaatgtcactcatcaacagtgtgctgaatatgtaacttccctt
ttgcagtccctctgtgatcaggatattgcacttattttaccaagttcatcagaaggctct
gtgtctgaattagagcagctttccaactccttaccaagcaaagagctgatgcccttaatt
tgtgactgtctgatggaaacattaatgaattctgagagcagttacagttgtctgctgaca
tgcatccgaacaatgatgttccttacagagcatgactatggcttctaccacttgaagagc
tctctaagaaaacacagcaatgctctgtacactgtattaaagcgagtaataactagtttc
agcaaagacacgggtgaactcgcctcttcatttttggattttatgcggcagattctgaac
tctgatacgctgggatgttgtggagatgatggaagccttatggaaacagatggatcccat
ccaggcagaacgctgggtcttaccactgcagagttaaaacatctactgcagaacaaagaa
gaaaccccagaaaacctgcttcttgatctggagaaacatgttatggatcgttctaaggaa
gatgatggccttgaatccttactggacaacattgttggagtgaggcagatgttggaatca
gcaggtgattcttgtccactgagtgaccaagatgttgagcctactctttctgcaccagac
tctcttcagaatttgtttaacaacaggactacatacgtgttggcagatgtgatggatgac
cagctgaagtccatgtggttctcaccctttcaggctgaagaaatagacactgacttggat
atggtaaaagttgatttaattgaactgtcagagaagggctgcagtgactttgacttgcaa
gctgaattggagaggtcatttttgtcagaaccatcatctcctggacgcacaaaaaccaca
aaaggcttcaagctcggcaagcacaagcatgagaccttcataacttcaagtgggaaatct
gagtacatagagcctgcaaagagagctcatgttgtgccaccacccagaggaagaggaagg
ggaggatttggacaaggaattcgaccacacgatatcttccgtcagaggaaacagaacaca
agcaggccaccctccatgcatgtggatgattttgttgctgcagagagcaaagaagtggtt
gctccagatgggataccaccagccaaaaggccaccaaaagtgtcacagaagatttcttcg
cgtggtgggttctcagggaatcgtggaggacgaggagcttttcacagtcagaacaggttc
tttacaccacctgcttcaaaaggaaattacagtcgtcgtgagggcgctcgaggctcaagc
tggagtgcacagagtacgcccaggggaacctacaatgacagtagaggtggtcaaagcaat
tttaacaggggtccactgccaccactgagaccattaagttcagcaggctaccgaccgagt
cctcgcgatcgtgcttccagaggccgcggaggaattggaccgtcttggacaagtgctaat
agtagtagcagtggtggctcaagaggaaagtttgttagtggaggcagtggaagaggtcgt
catgtacgttccttcacacgataa
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integrated database retrieval system
