Corvus cornix (hooded crow): 104693553
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Entry
104693553 CDS
T03546
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104693553
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccw01007
]
104693553
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccw03016
]
104693553
Enzymes [BR:
ccw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
104693553
Amino acid related enzymes [BR:
ccw01007
]
Aminoacyl-tRNA synthetase
Class II (A)
104693553
Transfer RNA biogenesis [BR:
ccw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
104693553
Prokaryotic type
104693553
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
tRNA-synt_2
HHH_3
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
104693553
NCBI-ProteinID:
XP_039415388
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Position
13:14208855..14214582
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AA seq
510 aa
AA seq
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MLRLGPIAAAARRLPAGPRPGPLCLAGSRGSFARSWPPAGDRGPLFRQVRAAAAGGERVR
VLKTPKGTRDHPPAQTALRDRLLSAVVSCFKRHGAAAIDTPVLELRETLMGKYGEDTKLI
YELQDQGGELLALRYDLTVPFARYLAMNKVTNMKRYHVAKVYRRDNPATTRGRYREFYQC
DFDIAGQFDPMIPDAECLKIVHEILSDLQLGDFIIKVNDRRILNGVFAVCGVPESKFIPA
CSTVDKLDKVPWEEVRSEMVGEKGLSPEAADRIGEYVQLHGGLDLVEHLLQDPKLSQNKL
AKEGLGDMKLLFEYLTLFGITEKISFDLSLARGLDYYTGVIFEAVLLHQENEHVEEAVSV
GSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSILEQRLEASGEKLRTTETQVLVA
TPQKHLLPARLKLISELWDAGIKAEMLYKKDPKLLKQLQYCEDTGIPLAAIVGEQELADG
VVKLRDVATREQVDIPREKLIDEIRRRLEP
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggctcgggcccatcgccgccgccgcccgccggctaccggcggggccccgcccc
gggccgctgtgcctcgctgggagccggggcagcttcgcccggtcctggccgccggccggt
gaccgcggacccctattccggcaggtgcgggcggcggcggcgggcggcgagcgggtgcgg
gtgctgaagacgcccaagggcacccgcgaccacccaccggcgcagacggcgctccgtgac
cggctcctgagcgccgtggtgtcgtgcttcaagcggcacggggcggccgccatcgacacc
cccgtgctcgagctgcgggagacgctgatggggaagtatggggaggacacgaagctcatc
tacgagctgcaggaccagggaggggagctgctggccctgcgctatgacctcaccgtgccc
tttgctcgctatctggcgatgaacaaggtcaccaacatgaagcgctaccacgtcgccaag
gtgtacaggagggacaacccagccacaacccggggccgctaccgcgagttctaccagtgc
gactttgacattgccgggcagtttgacccgatgattcccgatgctgagtgcctgaagatc
gtgcacgagatcctgagtgacctgcagctcggggacttcatcatcaaggtcaacgaccgt
cggattttgaatggtgtgtttgctgtctgtggtgttccagagagcaagttcatacctgcc
tgctccaccgtggacaagctggacaaggtgccatgggaagaagtgaggagcgagatggtg
ggagagaaggggctctctcccgaggctgcggatcgcattggggagtatgtccagctccat
ggtgggctggacctggttgagcatcttctccaggacccaaagctgtcccagaacaagctg
gccaaggaggggctgggggacatgaagctgctctttgagtacctgaccttgtttggcatc
acagagaagatctccttcgacctgagcctggcacggggcctggactattacacgggggtg
atctttgaggctgtgctgctgcatcaggagaacgagcacgtggaggaggcggtcagcgtt
gggagcgtggccggaggcggccgctatgacgggctggtggggatgtttgatcccaagggc
cggaaggtgccctgtgtgggggtcagcattgggatcgagcggatcttctctatcctggaa
cagagacttgaggcttctggggagaaacttcgaacaactgagacacaagtgctggtggct
acaccacagaaacacttgcttcctgccagactgaagctcatctcagagctgtgggatgca
gggatcaaggcagagatgctgtacaagaaggatcctaaattgctgaagcagctgcaatat
tgtgaggacacagggatcccccttgctgccattgtgggagagcaggagctggcagacgga
gtcgtcaagctgcgagatgttgcaacaagagagcaggttgatatccccagagaaaagctt
attgatgagatccggagaaggctggagccctga
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