Corvus cornix (hooded crow): 104696474
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Entry
104696474 CDS
T03546
Symbol
SCUBE1
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
104696474 (SCUBE1)
Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
104696474 (SCUBE1)
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Gene cluster
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_3
EGF_CA
CUB
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
104696474
NCBI-ProteinID:
XP_039426829
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All DBs
Position
1A:complement(61363832..61558507)
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AA seq
1018 aa
AA seq
DB search
MGTVCFSRRCCLLFALAWAGRLAGGSGGADVDECAEATDDCHIDAICQNTPKSYKCICKP
GYKGEGKQCEDIDECENDFYNGGCVHECINIPGNYRCTCYDGFMLAHDGHNCLDVDECLD
NNGGCQQICVNTMGSYECQCKEGFFLSDNQHTCIHRSIEGMNCMNKDHGCAHICRETPKG
GVACECRPGFELAKNQKDCKLTCNYGNGGCQHTCDDTDTGPVCGCHQKYALHSDGRTCIE
KDEAAIESSEYNATSVADVDKRVKRRLLMETCAVNNGGCDRTCKDTATGVRCSCPVGFTL
QPDGKTCKDIDECLVNNGGCDHFCRNTVGSFECSCQKGYKLLTDERTCQDIDECSFERTC
DHTCINYPGSFECLCHKGYTLYGLTHCGDIDECSISNGSCDFGCLNTMGSYECVCPPGKK
LHWNKKDCVEMVKCLPNAKPAPKAQLVCSKTGGIESCFLSCPSNTLFVPDSENSYTLSCG
VPAQHGKAQPRRNATLPSCSDSLAPPIKQKARFKIKDAKCHLRPRSKEKTKDSGKQAVSG
GQFSCTDNCQVTFVNLKCDSSKKKRRGRKSPSKEVSHITAEFEVEMKSEEVSDTCNIDCV
RKRMEQKLQTAIKTLRKSINKQQFYIQFSGTEYEVAQKPAKATEGHEACSTGQVLQDGKC
VTCSTGTFYSGEHNQCVPCSPGTYQDTEGQLTCEPCPSNDGQGVAGARNVSECGGQCSPG
HYSSDGFKPCTVCPLGTYQPEPGRTLCFPCGGGLVTKYEGAVSFQDCETKVHCSPGHYYN
STTHRCIRCPVGTYQPEFGQNYCITCPGNTSTDFDGSTNVTHCKNQHCGGELGDYTGYIE
SPNYPGDYPANVECIWNINPPPKRRILIVVPEIFLPIEDECGDVLVMRKSASPTSITTYE
TCQTYERPIAFTSRSRKLWIQFKSNEGNSGKGFQVPYVTYDEDYQQLIEDIVRDGRLYAS
ENHQEILKDKKLIKALFDVLAHPQNYFKYTAQESKEMFPRSFIKLLRSKVSRFLRPYK
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgggcactgtttgcttttcgcggcgctgctgtttgcttttcgctctcgcctgggccggc
aggttggcgggaggcagcgggggcgcagatgttgacgagtgcgcagaagctacggatgac
tgtcacatcgatgcaatttgtcaaaacacaccaaaatcctacaaatgcatctgcaagccg
ggctacaaaggggaagggaagcagtgtgaagatatcgatgagtgtgaaaatgacttctac
aatgggggttgtgtccacgagtgtatcaacattccgggcaactacaggtgtacatgctat
gatgggttcatgttagcccatgatggccacaactgccttgatgttgatgagtgtctggat
aacaatggagggtgccagcagatttgtgtaaatactatgggcagctacgaatgccagtgc
aaagagggcttttttctgagtgataaccagcatacctgcattcatcgctccattgagggt
atgaactgtatgaacaaagatcatgggtgtgcacacatctgccgggagacacccaaaggt
ggggttgcctgtgaatgtagacctggctttgaacttgccaaaaaccagaaggactgcaaa
ttaacctgtaactatgggaatggaggctgccaacacacctgtgatgacacagataccggt
cctgtgtgcggttgtcatcagaagtatgccctgcactcagatggccgaacctgcattgag
aaggatgaggctgcaattgagagttctgagtacaatgccacgtcagtagctgatgtggac
aagcgggtgaaacggcggctacttatggaaacatgtgctgtcaataacggaggctgtgat
cggacttgcaaggataccgcgacaggggtacggtgcagttgcccggttggatttaccctg
cagcctgatgggaaaacgtgcaaagatattgatgagtgtttggtaaacaatggtggctgt
gaccatttctgccgaaacacagttggcagctttgagtgcagctgccagaaaggctataaa
ctgctcacagatgaaaggacctgccaagatatagatgagtgttcctttgaaaggacctgt
gaccacacctgtatcaactaccctggaagctttgagtgtctctgccacaaaggctacacc
ttgtacggactgacgcactgtggagatattgatgaatgcagcatcagcaatggtagctgt
gactttgggtgccttaataccatgggaagctatgagtgtgtctgcccacctggaaagaaa
ctgcactggaataaaaaggactgtgttgagatggtgaaatgtctcccaaatgccaaacca
gctcccaaggctcagctagtgtgcagtaagacaggaggcatagagagctgcttcctgtcg
tgcccatccaatactctttttgttccagactcggagaacagctacacgctgagctgcggc
gtccccgcgcagcacggcaaggcgcagcccaggcgcaacgccaccctgcccagctgctca
gattccctggcccctccaatcaagcagaaagctcgttttaaaatcaaagatgcaaaatgc
catttacggcctcgcagcaaagaaaaaacaaaagattctgggaagcaggctgtttcagga
ggtcagttctcctgtacagacaactgtcaggtgacctttgtgaatctcaagtgcgattcc
tccaagaaaaaacgcagaggccgcaagtcaccatcaaaagaagtgtcccatatcacagca
gagtttgaagtggagatgaagtctgaagaagtctcagacacctgtaacattgactgtgtt
cggaaaaggatggagcagaagctgcaaactgcaatcaaaacattgaggaaatctattaat
aaacagcaattttacattcagttttctgggacagaatatgaagtggctcagaagccagct
aaagctactgaagggcatgaagcgtgcagtacggggcaagtactgcaggatggaaaatgt
gttacctgcagcacgggcaccttttatagcggagaacacaatcagtgcgttccgtgctcg
ccaggaacgtaccaggacacagaaggtcagctcacctgtgagccttgccccagtaacgat
ggccagggagtggcgggcgcccggaacgtgtcggaatgtggagggcagtgttctcctggg
cactactcttcagatggttttaaaccttgtacagtctgtcctcttggtacatatcagcct
gaaccaggaaggaccctctgctttccctgtggcggtgggcttgtgaccaaatacgaaggt
gctgtttcctttcaagactgtgaaaccaaagttcactgttctcctggacactactacaac
tccacaacacatagatgcatccggtgccctgtgggaacataccagcctgagtttggtcaa
aactactgcatcacctgccctggcaacaccagcacagatttcgatggctccaccaatgtc
acgcattgcaaaaaccagcactgtggaggagaactgggggactacactggctacattgaa
tcacccaactatcctggagactacccagctaatgtggaatgcatttggaatataaaccca
cccccaaagagaagaatactcatcgtagtacctgagatatttctcccgattgaagatgaa
tgtggtgatgttttagtaatgagaaaaagtgcttctcctacttcaattactacatatgaa
acatgtcagacatatgagagacctattgcatttacctcaagatcgaggaaactctggatt
cagttcaagtcaaatgaaggaaacagtggcaaaggatttcaggtcccctatgtgacctac
gatgaggattaccaacaactcatagaagacattgttcgagacggccgattatatgcgtca
gaaaaccatcaagaaattctcaaggacaagaaactgattaaagctctctttgatgtactg
gcacacccacaaaactacttcaagtacacagcacaagagtcaaaagaaatgtttccaaga
tcatttataaagctactgcgatcaaaagtttccaggtttctacgaccatacaaatag
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