Corvus cornix (hooded crow): 104696708
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Entry
104696708 CDS
T03546
Symbol
TRA2B
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
KO
K12897
transformer-2 protein
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104696708 (TRA2B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccw01009
]
104696708 (TRA2B)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccw03041
]
104696708 (TRA2B)
Protein phosphatases and associated proteins [BR:
ccw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104696708 (TRA2B)
Spliceosome [BR:
ccw03041
]
Common components
Common spliceosomal components
SR proteins
104696708 (TRA2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
FMP27-BLTP2_C
Motif
Other DBs
NCBI-GeneID:
104696708
NCBI-ProteinID:
XP_039412734
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All DBs
Position
9:complement(23448852..23464395)
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AA seq
289 aa
AA seq
DB search
MSDSGEQNYGERESRSASRSGSAHGSGKSGRHTPARSRSKEDSRRSRSKSRSRSESRSRS
RRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHIGNRANPDPNCCL
GVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVEDAKEAKERAN
GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY
RGGGGGGGGGWRAVQDRDQFYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacagcggggagcaaaactacggcgagcgggaatcccgttctgcttccagaagc
ggaagtgctcatgggtctggcaagtcggggaggcacacccctgcaagatctcgctctaag
gaggattccaggcgctccaggtcaaaatctagatccaggtctgaatccaggtctagatcg
aggaggagttcccgcagacactacaccaggtcccgctcccggtcccgctcccacaggaga
tccagaagtaggtcgtacagtcgggactacaggcgacggcacagtcacagccattccccc
atgtctactcggagacgtcacattggaaacagggcaaatcctgacccaaactgttgtcta
ggagtgtttgggctgagcctgtacactacagaacgagacctgcgagaggttttctccaag
tatgggcccattgccgacgtttccatcgtgtacgatcagcagtcgcggcgttcccgaggg
ttcgcgttcgtctacttcgagaacgtcgaggatgccaaggaagcaaaggaacgtgccaat
ggaatggagttggatggaagaaggattcgggtagacttttccataacaaaaagacctcac
acacctacccctggaatctatatgggacgacccacttacggcagctcacggcgacgagat
tactatgacagagggtatgacagaggctacgatgaccgtgactattacagcaggtcatac
agaggaggaggtggtggcggcggaggaggctggagagctgttcaggacagggatcagttt
tacaggaggaggtcaccatcgccatactacagccgagggggctacagatcccggtccaga
tcccgatcctactcacctcgtcgctattaa
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