Corvus cornix (hooded crow): 104697795
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Entry
104697795 CDS
T03546
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03013
Nucleocytoplasmic transport
ccw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104697795 (CASC3)
03015 mRNA surveillance pathway
104697795 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104697795 (CASC3)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104697795 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
104697795
NCBI-ProteinID:
XP_039421742
LinkDB
All DBs
Position
27:490531..502126
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AA seq
721 aa
AA seq
DB search
MADRRRQRASQDSEDSEGSAASDSAGSVPGSPPLRPLPLGLRIPIPLRLAPPTAPPAARR
RRGPRRWAAGPRGRERRWGGGKSAAESECESEDGIEGDAVLSDYESAEDSEAEEEDYSEE
ESSKVELKQDSNDSCESAARGEKGSEKADPKGAVTGERQSGDGQESTEPVEKKVGKKVPK
HLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQ
APKTRQELIALYGYDIRSAHNPDDIKPRRMRKPRFGSPPQRDPNWSNERPPKPPRHQGAK
SPSAPPRSFNSRSSASTGRMPPARNYPRMGGYKETRPGYRASEATVPHRNGEQAKQESSY
RGKRTEQSPSRDTSPELEVAHVHGSPGKEEGALENQAMAADAAQPPPDRPVEKKSYSRAR
RTRVKAGEAGKLAEEAPASEGVAPVIPKPTPAESSPPPAKSNWESPVESSVDGLEQEMTQ
MNLTEQNWSPGQSQFIPPRELRGIPNHMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQR
PPVPEPAPPMHISIMEGHYYDPLQFQGPIYTHGENPAPLPPQGMIVQPEMHLPHPGLHPH
QTPPAMANPGLYPPPVSMPPGQPPPQQLLTPTYFSAPGVMNFGNPGYPYPPGALPPPPPP
HLYSNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKSKERSN
T
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcctcccaggacagcgaggacagcgagggctcggcg
gcctccgacagcgccggctccgtgcccggttcgcccccgctccgcccgctcccgctcggg
ctccggatcccgatcccgctccggctcgccccgcccaccgcaccgcccgccgcgcggcgc
cgccggggccctcggcgctgggccgcggggccgcggggccgagagcgccggtggggcggg
gggaagagcgcggccgagtcggagtgtgaaagtgaggatggcatcgaaggagatgctgtg
ctctctgactacgaaagcgccgaggactcggaggcagaggaagaggattacagcgaggaa
gaaagctccaaggtggagctgaagcaggacagcaacgattcctgcgagtcggcggccaga
ggggagaaggggagtgagaaggcagatcccaagggagcggtgacgggcgagcggcagagc
ggggacgggcaggagagcacggagcctgtggagaagaaagttgggaagaaggttcccaag
cacctggacgacgatgaggatcggaagaacccagcatacatcccacgcaaggggctcttc
tttgagcatgacctccgagggcagacgcaggaggaggaggtcaggccaaaaggtcgtcag
cggaagctgtggaaggacgaggggcgctgggaacatgacaaattccgtgaggacgagcag
gcccccaagaccaggcaggagctgatcgcactgtacggatatgacatccggtcagcccac
aaccccgacgacatcaaaccccggaggatgcgcaaaccacggtttggcagtccccctcag
cgagacccgaactggtccaacgagaggccccccaagcccccaaggcaccagggtgccaag
agcccctcagcccccccacgctcattcaacagccgcagctctgccagcaccggcaggatg
ccccctgccaggaactaccccaggatggggggctacaaggagacccggccaggctaccgg
gcttcggaagcgactgtcccgcaccggaatggggaacaagccaagcaggagagcagctac
cgtgggaagcgcacagagcagagcccctcgagggacacgtcccccgagttggaggtggca
catgtccacggcagccctgggaaggaggagggggctctggaaaaccaagccatggctgcc
gacgctgcgcagccgccgccagacagaccagtcgagaagaaatcttattcccgggcaaga
aggaccagagtcaaggctggggaagcggggaagctggcagaggaagcgcccgcttccgag
ggggtggctcccgtgattccaaaacccacgccagctgagagctcccccccaccagccaag
agcaactgggagtcgccagtggaatccagcgtggatggacttgagcaggagatgacccag
atgaacctgacggagcagaactggagcccagggcagtcccagttcatcccgccccgggag
ctgaggggtattcccaaccatatgcacgtgggaactgggccaccgccgcagtttaaccgg
atggaggagatggcagtgcaggggggccgtgtgaagcgctactcatcgcagcggcagaga
ccccccgtgccggagccagcgccccccatgcacatcagcatcatggaagggcactactac
gacccactacaattccagggaccaatctacacccatggtgagaacccagccccgctgccg
ccccaagggatgattgtgcagccggagatgcaccttcctcatccaggtttacacccccac
cagacgccccctgccatggcaaaccctggcctctaccccccaccagtgtccatgcccccg
ggccagcctccaccgcagcagctgctcactccgacttacttctccgcccctggagtgatg
aattttgggaatcctggctacccctacccccctggagctctgccccctccgccccctcct
catctctattccaacacgcaggcgcagtcccaggtgtatgggggggtcacctactacaac
actgtccagcagcaggtgcagcccaagccctccccgccccgccggacgtcccagcctgtg
accatcaagccgccccctccagaggacagcaaaggtgaaaaatcaaaggagaggagcaac
acgtag
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