Corvus cornix (hooded crow): 104697964
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Entry
104697964 CDS
T03546
Symbol
KDM1A
Name
(RefSeq) lysine-specific histone demethylase 1A isoform X1
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104697964 (KDM1A)
Enzymes [BR:
ccw01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
104697964 (KDM1A)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
104697964 (KDM1A)
REST complex
104697964 (KDM1A)
Histone demethylases
104697964 (KDM1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
Pyr_redox
AlaDh_PNT_C
FAD_binding_2
FAD_oxidored
HI0933_like
FAD_binding_3
Thi4
Pyr_redox_3
2-Hacid_dh_C
DUF6827
Sec10_N
MurD-like_N
GIDA
Lycopene_cycl
IlvN
Motif
Other DBs
NCBI-GeneID:
104697964
NCBI-ProteinID:
XP_039420580
LinkDB
All DBs
Position
23:complement(7352997..7397806)
Genome browser
AA seq
850 aa
AA seq
DB search
MLAGGKKGAEAAAGGEAGPEAPVPPPAAAGALGSSSDSGGASERTPRKKEPPRASPPGGV
SEPSAAGATPAPGAETTGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERN
AKAEKEKKLPPPPPPAPAEEENESEPEEPSGQAGGLQDDSSGGYGDGQASGVEGAAFQSR
LPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWLDNPKIQLTFEATIQQLEAPY
NSDTVLVHRVHSYLERHGLINFGIYKRVKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGM
DVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPL
YEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKH
VKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKS
KHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANAT
PLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEV
IAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKV
VLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDV
IVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITP
GPAIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQPTP
GVPPQQAASM
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgggcggcaagaagggcgcggaggcggcggcgggcggcgaggccgggccagag
gcgccggtgcccccgcccgccgccgccggggccctgggctcctcttcggatagcggcggg
gcttcggagcgcacgccccgcaagaaggagccgccgcgggcctcgcctccgggcggtgtg
tccgagccgtcggctgccggggccacccctgcgcccggcgccgaaaccaccggcatcgcc
gagacccccgagggccgcaggaccagccgccgcaagcgagccaaagtggagtatagagag
atggatgagagtcttgcaaacctgtcagaagatgagtattactctgaagaagagagaaat
gctaaagctgagaaagagaaaaaactacccccaccacctccaccggctcctgcagaagaa
gagaatgaaagtgagccagaggaaccgtctgggcaagcaggaggacttcaagacgacagt
tctggagggtatggagacggccaagcatcaggtgtggagggtgcagctttccagagtaga
cttccacatgaccgtatgacatctcaagaagctgcctgcttccctgatataatcagtggg
ccacagcagactcagaaggtgtttttgtacatcaggaaccgcactctgcagctctggttg
gataacccaaagattcagctgacgtttgaagcaactatccaacaattagaagcaccttat
aatagtgacacagtgctcgttcatagggttcacagctacctggagcgtcatgggctgatc
aactttgggatctacaaaagagtgaagccccttccaaccaagaagacaggaaaggtgatc
attattggttctggagtctctgggttggcagcagctcgccagttgcagagttttggaatg
gatgtcacagttctggaagccagagaccgagtaggaggaagagttgctacctttcgcaaa
gggaactacgttgcagatctaggagcaatggtggtaacaggacttggaggaaatcccatg
gctgtggtcagcaaacaagttaatatggaattggcaaagatcaaacaaaaatgtccactt
tatgaagcgaatggacaagctgttcccaaagagaaagatgaaatggtggagcaagaattt
aatcgtttgctggaagccacatcctatctcagtcatcagctggattttaatgttctcaat
aataagcctgtctctctaggtcaggctctggaggttgtcatacaattgcaggagaagcat
gtgaaggatgagcagattgagcactggaaaaaaattgtgaaaacacaggaggaattgaaa
gatcttcttaacaagatggtgaatttaaaggagaagattaaagaacttcatcagcagtat
aaggaagcatcagaagtgaagccacctcgggatattacagcagagttccttgtgaaaagc
aagcacagagatctgactgcactttgcaaggagtatgatgaattggcagaaacacaagga
aagctggaagagaaattacaagaacttgaagccaatccaccaagtgatgtttatttgtca
tcaagagacaggcaaatactcgactggcattttgcaaacctagaatttgctaatgctaca
cccctttctacgctttcactgaagcactgggaccaggatgatgactttgaattcacaggc
agtcacttgactgtgaggaatggatattcctgtgtgccggtagccttagcagaagggttg
gatattaagttaaacacagcggttcgacaggttcgctatacagcatcaggctgtgaagta
atagctgtaaatacccgatctaccagccagaccttcatttataagtgtgatgctgtactg
tgcactctgcccttgggagtgctgaaacagcagcctccagcagttcagtttgtgccacct
ctgcctgagtggaaaacttctgcagtgcagcgtatgggatttggcaacctgaacaaggtt
gtgttgtgttttgatcgtgtcttctgggatccaagtgtcaatttgtttggccatgttggg
agcactactgcaagcagaggagaacttttcctcttttggaacctgtacaaagcaccaatt
ttgttggccttggtagcaggagaagcagcagggatcatggagaatatcagtgatgatgtc
attgttggtcggtgccttgccattctcaaaggcatatttggcagcagcgctgtgccccag
cctaaagagactgtggtgtcccgctggcgtgctgacccgtgggcccggggatcgtactcc
tatgtagcagctggatcctctggaaatgactatgatttgatggctcagccgattactcca
gggccagccattccaggtgctccgcagcccattcctcgcctgttctttgcgggtgaacac
accattcgcaactaccctgcgactgtccacggcgcattgctgagcggcctgagggaagcc
ggccgcatcgcagaccagttcctgggggccatgtacacactgccacggcagcccacgcca
ggcgtgcccccccagcaggctgccagcatgtga
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