Corvus cornix (hooded crow): 104698221
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Entry
104698221 CDS
T03546
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00514
Other types of O-glycan biosynthesis
ccw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
104698221 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104698221 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccw01003
]
104698221 (RFNG)
Enzymes [BR:
ccw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
104698221 (RFNG)
Glycosyltransferases [BR:
ccw01003
]
Glycan extension
O-Glycan
104698221 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
104698221
NCBI-ProteinID:
XP_010411735
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All DBs
Position
18:complement(12397950..12406033)
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AA seq
368 aa
AA seq
DB search
MNGPCLGLRRVGVLLSLGAAALLLLLLPRGQRPAVPRPPPAAGPSAPPQHRAGPEGSAGA
PGGGPGAGGRGGGLAGSPQLSRRGRLGAAGSSARESLELKDIFIAVKTTRKYHKSRLDLL
LQTWISQARGQTFIFTDWEDRELRLKAGDHMINTNCSAVHTRQALCCKMSVEYDKFLESG
QKWFCHVDDDNYVNPRTLLHLLSAFSHSQDVYVGRPSLDHPIEAADHVQSDGSKTTVKFW
FATGGAGFCISRGLALKMSPWASLGNFISTAERVRLPDDCTIGYIIEGLLEVKLLHSPLF
HSHLENLQRLQGESVLQQVTLSYGDPENKHNVVSVGGVFGLQQDPTRFKSVHCLLYPDTI
WCPAKKMS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtccttgcctggggctgcgcagggtgggggtcctgctgtctctgggcgccgcc
gccctcctgctcttgctgctgccgcgggggcagcgccccgccgtgccccgcccgccgccc
gccgctgggcccagcgcgcccccgcagcaccgtgcgggccccgaaggctctgccggagcg
ccgggcggcgggcccggggccggcggccgtggcggaggcctcgcgggtagcccgcagctc
tcgcggaggggccgcctcggggccgccggcagctcggccagggagagcctagagctgaag
gacatctttattgcggtgaagaccacgaggaagtaccataagagccgcctggacttgctc
ctccaaacctggatctcccaggcgaggggacagacgtttatattcacagactgggaggat
cgggagctacgcctgaaagcaggggatcatatgatcaacaccaactgttccgctgttcat
acccggcaagctctctgctgcaagatgtctgtggaatatgataaattcctggaatctggg
caaaaatggttttgccatgtggatgatgacaactacgtgaaccctcggactctcctgcat
ctcttgtctgccttctcacacagccaggacgtctatgtggggcgaccgagcctggaccat
cccatcgaagcagctgaccatgtccaaagtgatggatcaaagacaactgtgaaattctgg
tttgccacaggtggagctgggttctgtatcagccgaggtcttgccctgaagatgagtccc
tgggccagcctgggcaatttcatcagtaccgcagaaagagtgcgtcttcccgatgactgc
actattggctacatcatcgaagggctgctggaggtaaagctgctacacagcccgttgttc
cattcccacctggaaaatctgcagagactacaaggcgagtctgtgctgcagcaggtaacc
ctgagttacggtgaccctgagaacaaacacaatgtcgtgagtgtgggaggagtgtttggc
cttcagcaagatccaacccgatttaaatctgtccattgtctgctttatcctgacactatt
tggtgccctgctaagaagatgtcataa
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