Corvus cornix (hooded crow): 120410873
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Entry
120410873 CDS
T03546
Symbol
ZIC5
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein ZIC 5
KO
K09226
zinc finger protein ZIC 5
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
120410873 (ZIC5)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
120410873 (ZIC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_ZIC
zf-C2H2
zf-H2C2_2
zf-C2H2_8
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
120410873
NCBI-ProteinID:
XP_039417334
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All DBs
Position
1:complement(78685144..78693381)
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AA seq
636 aa
AA seq
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MFLKAGKGKKITTASVDGLGCVVMEPPLSKRNPTLRLADLAAAQPHPHQNMTGFPGLGNH
HPPPHAAHLHPGDAGGDPGGALTPLGPEHMAQPAALKLTPEALTAAAAAFAAPAXPPPPP
PPPPPPPLPPPLPPAPPAAALPGYPSGGAAGRDFLLRRELPATAAAVHGRXGEQHPPASS
PHLPHPPPHGVFISAAGTYGATDGAHAAFPPPPPGEQGAPAGRHPPLNGQMRLGLAAAAG
ELYGRAEAHYGAAAASSSSALQGYGSVNLNLAAAGHGHPHHPHPHHHHHHHHHHHAHVGG
RGGGAAGAFLRYMRQPIKQELICKWIDREPPPXPPPPPSGGRKPCSKTFSTMQELVSHVT
VEHVGGPEQSSHVCYWEECPREGKPFKAKYKLINHIRVHTGEKPFPCPFPGCGKVFARSE
NLKIHKRTHTGEKPFKCEFDGCERKFANSSDRKKHSHVHTSDKPYYCKIRGCDKSYTHPS
SLRKHMKIHCKSPPPSPPPGSQGYAAAGPPDGPLPPEADPAAEPPRGRAAALSPPVTNLS
EWYVCQAGGAPAGPAPPPAATPPRHPRRTSPTGPREAELLPRAVPSHAKLPVAPAPLHWP
GRSGSHLARGAAVEVPSGLTRAIYSMYETLWCLYSN
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgaaggcgggtaaagggaaaaaaataacaacagcgagcgtagatgggcttggc
tgtgtcgttatggagccccctttgagcaagaggaacccgacactgagattagcggatttg
gcagcggctcagccccatcctcaccagaacatgacaggcttcccggggctggggaaccac
cacccacccccacacgcggcccacctccaccccggggacgcgggcggcgaccccggcggc
gccctcacgccgctcggacccgagcacatggcgcagcccgccgccctcaagctcacgccc
gaggcgctcaccgccgccgccgccgccttcgccgcgcccgccnngccaccaccaccgccg
ccgccgccgccaccgccgccgctgccaccaccgctgccgcctgcgccgcccgccgccgcc
ctcccgggatacccgtcggggggggcggcgggccgggacttcctcctgcggcgggagctg
cccgccaccgccgccgccgtgcatgggcgcntgggcgagcagcacccgcccgccagctcc
ccccaccttccgcacccgccacctcacggcgtcttcatctcggccgccggcacctacggc
gcgaccgacggggcgcacgccgccttcccgccgccgcctcccggcgagcagggcgcgccc
gccggccgccacccgccgctcaacgggcagatgcgcctggggctggcggccgccgccggg
gagctctacgggcgcgccgaggcgcactacggggccgccgccgcctcctcctcctcggct
ttgcaaggctacggctccgtcaacctcaacctggcggcggccggccacgggcacccgcac
cacccccatccccaccaccaccaccatcaccaccatcaccaccatgcccacgtcgggggc
cgcggcggcggcgcggctggggccttcctccggtacatgcgacagcccatcaagcaagag
ctgatctgtaagtggatcgaccgggagccgcctcctncacctccgccgccgccatcgggc
ggtaggaagccttgctccaaaactttcagcacgatgcaggagctggtgagccatgtcacc
gtggagcacgtcggtgggcccgagcagagcagccacgtgtgctactgggaggagtgtccc
cgcgaaggcaagcccttcaaagcgaaatacaaactcatcaaccacatccgagtgcacacg
ggagagaaacccttcccttgccccttccccggctgcgggaaggtcttcgctcgctccgaa
aacctcaagatccacaaacgaactcatacaggggagaagcccttcaagtgcgagttcgac
ggctgcgagaggaagttcgccaacagcagcgaccgcaagaagcattcccacgtccacacc
tcggacaagccctactactgcaagatccgcggctgcgacaagtcctacacccaccccagc
tccctgcggaagcacatgaagatccactgcaagtccccgccgccctccccgccgccaggc
tcccagggctacgcggcggcggggccccccgacggcccgctgccccccgaggccgacccg
gccgccgagccgccccgcggccgcgccgccgccctctccccgccggtcaccaacctcagc
gagtggtacgtctgccaggccgggggggctcccgccggccccgcaccccctccagccgcg
acacctccccggcatccgaggaggacgagccccacaggacctcgggaggcagaactgctc
cctagggccgtgccgagccatgccaagctgccggtggccccggccccactgcactggccc
ggccgcagcggcagccacctggcacggggggctgccgtggaagtgccatcaggtttgact
cgcgctatttattccatgtacgaaaccctatggtgtttgtacagtaactaa
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