Corallococcus coralloides: COCOR_04862
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Entry
COCOR_04862 CDS
T01780
Symbol
oppD
Name
(GenBank) oligopeptide/dipeptide ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
ccx
Corallococcus coralloides
Pathway
ccx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
COCOR_04862 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccx02000
]
COCOR_04862 (oppD)
Transporters [BR:
ccx02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
COCOR_04862 (oppD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AFE09697
UniProt:
H8MM81
LinkDB
All DBs
Position
complement(6140157..6141167)
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AA seq
336 aa
AA seq
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MTGVAPAPLLDVRGLVTQLSLPRGTVRAVDGVSFTVPPGGTLGVVGESGCGKSLTALSVM
RLVPQPPGRVVGGEVRFRGEDLLALPEKEMRRVRGRHVAMVFQEPMTSLNPVFTVGEQIG
EGVRLHLGATRAQARERAVEMLRQVGIPAPGERVDAYPHQLSGGMRQRVMIAMALACDPA
LLIADEPTTALDVTIQAQILELLKRLQAERNMAVMLITHDLGVVAGSCDAVVVMYAGRIV
EQAPVRELFARPAHPYTAGLLRSIPSLHDAGAAVEGGRQRLKAIPGMVPSLTALPSGCAF
RDRCDRASELCARVTPALEPKRGGQSAACHYPVPAP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggcgtcgcgccggccccgctcctggacgtgcgggggctcgtcacccagctgtcg
ctcccgcgcggcacggtgcgcgcggtggacggcgtgtccttcaccgttcctcccggcggc
acgctgggggtggtgggggagagcggctgtggcaagagcctgacggcgctgtcggtgatg
cggctcgttccgcagccgcccggccgcgtggtgggcggcgaggtgcgcttccggggcgag
gacctgctggcgctgccggagaaggagatgcggcgcgtgcgcggccggcacgtggccatg
gtcttccaggagcccatgacgtcgctcaacccggtgttcaccgtgggcgagcagattggc
gaaggcgtccggctgcacctgggcgccacccgggcgcaggcgcgtgagcgcgcggtggag
atgctccggcaggtgggcatcccggcgcccggcgagcgcgtggacgcgtacccgcatcag
ctctccggcggcatgcgccaacgcgtgatgatcgccatggcgctcgcgtgcgacccggcg
ctgctcatcgcggacgagcccaccacggcgctggacgtcaccatccaggcgcagatcctg
gaactgctcaagcgcctgcaggccgagcggaacatggcggtgatgctcatcacccacgat
ctgggcgtggtggcgggcagctgcgacgcggtggtggtgatgtacgcgggccgcatcgtg
gagcaggcgccggtgcgcgagctgttcgcgcggcccgcgcacccgtacacggcgggcctc
ttgcgctccatcccgtcgctgcacgacgcgggcgcggcggtggagggtgggcgtcagcgc
ctgaaggccattcccggcatggtgccgtcgctcaccgcgctgccgtccgggtgcgcgttc
cgcgaccgctgcgaccgcgcctcggagctgtgcgcccgcgtcacgcccgcgctggagccg
aagcgcggaggccagtccgccgcctgccattatccggtgcccgcgccatga
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