Corallococcus coralloides: COCOR_06234
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Entry
COCOR_06234 CDS
T01780
Symbol
ddl1
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx00470
D-Amino acid metabolism
ccx00550
Peptidoglycan biosynthesis
ccx01100
Metabolic pathways
ccx01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
COCOR_06234 (ddl1)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
COCOR_06234 (ddl1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
COCOR_06234 (ddl1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccx01011
]
COCOR_06234 (ddl1)
Enzymes [BR:
ccx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
COCOR_06234 (ddl1)
Peptidoglycan biosynthesis and degradation proteins [BR:
ccx01011
]
Precursor biosynthesis
Amino acid ligase
COCOR_06234 (ddl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_3
ATP-grasp_4
GARS_A
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
AFE08536
UniProt:
H8MNV3
LinkDB
All DBs
Position
complement(7841975..7842952)
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AA seq
325 aa
AA seq
DB search
MGKRVGVLMGGWGEEREISLKTGEAVVAALETLGHTVTRVFAGPGLDRALRAADIDVAFL
ALHGRMGEDGRVQGLLELLEIPYTGSGVLASALAMDKPMAKKLFQLHNLASPRGYRVARE
DAERALELHGDSGFPCVVKPAKGGSSVGLSVVHDAGALVPVVVQACRFGGEALVERFVQG
QEVTVGILGDSVLGSCEVSYPREGFDYEAKYKGGGAQYFLPPRLSDVRRVNVESLALAAY
RALGCRGYGRVDLMCSDTENDVVLEVNTLPGFTPTSLLPKIAARAGLDFPALVQGVLDRA
TRDESHVAEGPALAPAAPVPLRVAR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcgcgtgggagtgctgatgggcgggtggggcgaagagcgggagatttcgctc
aagacgggggaggccgtggtggcggccctggagaccctggggcacaccgtcacccgcgtc
ttcgcgggcccgggcctggaccgggcgctgcgcgcggcggacatcgacgtggccttcctc
gcgctgcacggccgcatgggcgaggacggccgcgtgcagggcctgctggagctgctggag
attccgtacaccggctccggcgtgctggcctccgcgctggccatggacaagcccatggcg
aagaagctcttccaactgcacaacctggcctcgccccggggttaccgggtggcccgcgag
gacgcggagcgcgcgctggagctgcacggcgacagcggcttcccctgcgtggtgaagccc
gcgaagggcggctcgtccgtgggcctgtccgtggtgcacgacgccggggcgctggtgccc
gtggtggtccaggcgtgccgcttcggcggcgaggccctggtggagcgcttcgtccagggc
caggaggtgacggtgggcatcctcggcgacagcgtgctgggcagctgcgaggtgtcctac
ccgcgcgagggcttcgactacgaggccaagtacaagggcggcggcgcccagtacttcctc
ccgccccgcctgtccgacgtccgccgcgtcaacgtggagtcgctcgcgctcgcggcctac
cgggccctgggctgccggggctacggccgggtggacctgatgtgctccgacacggagaac
gacgtggtgctggaggtgaacaccctgccgggcttcacccccaccagcctcctgccgaag
atcgccgcccgcgcgggcctggacttccccgcgctggtgcagggcgtgctggaccgcgcc
acccgtgacgagtcccatgtcgcggaaggccccgccctcgcgcccgcggctcccgtgccc
ctgcgcgtcgcgcgctag
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