Corynebacterium cystitidis: SAMEA4530656_0802
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Entry
SAMEA4530656_0802 CDS
T07131
Symbol
mutM_1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ccys
Corynebacterium cystitidis
Pathway
ccys03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA4530656_0802 (mutM_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccys03400
]
SAMEA4530656_0802 (mutM_1)
Enzymes [BR:
ccys01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SAMEA4530656_0802 (mutM_1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SAMEA4530656_0802 (mutM_1)
DNA repair and recombination proteins [BR:
ccys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAMEA4530656_0802 (mutM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zinc-ribbons_6
TMEM37
NFACT_N
Auto_anti-p27
PknG_rubred
Motif
Other DBs
NCBI-ProteinID:
SNV71527
LinkDB
All DBs
Position
1:821658..822482
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AA seq
274 aa
AA seq
DB search
MPELPEVEVVRRGLDEHVRGLTFREIEVLHPRAVRDNDVDLTDVLPGLTIDTVRRRGKYL
WFELSDGYALVIHLRMSGQMLVGKHGEVTSPHLRIRADLGDRELCFVDQRTFGYWHYASL
DDEGLPTTMAHIAPDPFDASFDVIATARAMRSKNSAVKTVLLDQGIVSGIGSIYADEAMW
AAGVKPTRKARGLRQKDAVRLLEESREVMARALAQGGTSFDSLYVNVNGASGYFSRSLNA
YGQVDRPCARCGNPIKRTKVNGRSSYFCATCQVI
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactgcctgaagttgaagtggtgcgtcgtggcctcgatgagcatgttcgtgga
ctgaccttccgcgaaattgaagtgctccatccgcgtgctgtgcgcgacaacgatgttgat
ctcaccgatgttctgccagggcttactatcgatacagtgcgccgccgcgggaagtacttg
tggtttgagctgtctgacggctacgcactggtgattcacctgcgcatgagtggccagatg
ctcgtcggcaagcacggcgaggttaccagcccgcacttaaggatccgcgcggacctcggt
gatcgtgagctgtgtttcgtcgatcagcgcacctttggctactggcactatgcctcgctt
gacgacgagggcctccccacgacgatggcccacattgcacctgacccatttgacgcttct
ttcgatgtaattgccacggcacgtgccatgcgatctaagaactcggcggtgaaaacggtg
ttgctggaccaggggatcgtgtctggtattggttctatctacgctgatgaagccatgtgg
gctgctggcgtcaagccgaccaggaaagcgcgcggactgcggcaaaaagatgccgtgcgc
ctgctcgaagagtcgcgtgaagtgatggcccgcgctttagcgcaaggcggcaccagcttc
gattccctgtacgtgaacgtcaacggtgcgagtggctatttttcgcggtcgctcaacgcg
tatgggcaggtagaccggccgtgtgcacggtgtggcaacccaattaaacgcactaaagtt
aacggccgctcaagctatttttgcgctacttgccaggtgatttaa
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