Clostridioides difficile CD196: CD196_3253
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Entry
CD196_3253 CDS
T00997
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc00470
D-Amino acid metabolism
cdc01100
Metabolic pathways
cdc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CD196_3253 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CD196_3253 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cdc01011
]
CD196_3253 (alr)
Enzymes [BR:
cdc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
CD196_3253 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
cdc01011
]
Precursor biosynthesis
Racemase
CD196_3253 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
CBA66582
UniProt:
A0A0H3NG87
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All DBs
Position
complement(3855527..3856684)
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AA seq
385 aa
AA seq
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MQKITVPTWAEINLDNLRFNLNNIKNLLEEDIKICGVIKADAYGHGAVEVAKLLEKEKVD
YLAVARTAEGIELRQNGITLPILNLGYTPDEAFEDSIKNKITMTVYSLETAQKINEIAKS
LGEKACVHVKIDSGMTRIGFQPNEESVQEIIELNKLEYIDLEGMFTHFATADEVSKEYTY
KQANNYKFMSDKLDEAGVKIAIKHVSNSAAIMDCPDLRLNMVRAGIILYGHYPSDDVFKD
RLELRPAMKLKSKIGHIKQVEPGVGISYGLKYTTTGKETIATVPIGYADGFTRIQKNPKV
LIKGEVFDVVGRICMDQIMVRIDKDIDIKVGDEVILFGEGEVTAERIAKDLGTINYEVLC
MISRRVDRVYMENNELVQINSYLLK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaataacagtgcctacatgggcagagataaatctagataacttaagatttaac
ttaaataatattaaaaatttattagaagaagatattaagatttgtggagtaataaaagct
gatgcatatggacatggtgcagtagaagttgcaaaattgctagaaaaagaaaaagtagat
tacttagcagtagcaagaactgctgaaggaattgaacttagacaaaatggcataacactt
cctattttgaacttgggatatactccagacgaagcttttgaagattctataaaaaataaa
ataactatgacagtttattctttagaaacagcacaaaagataaatgaaattgcaaaatct
ttaggagaaaaagcctgtgttcatgttaaaatagactcagggatgactagaataggtttc
caacctaatgaggagtcagtacaggaaataatagaattaaataaattagaatatatcgat
ttagaaggtatgtttactcattttgctacagctgatgaagtaagtaaagagtacacttat
aaacaagctaataattataaatttatgtctgataaattagatgaggctggtgtaaaaata
gctataaaacatgtatcaaacagtgcagctattatggattgccctgatttaagattaaat
atggtaagagcaggaataatattatatggtcattatccatctgatgatgtatttaaagat
agattagaattaagaccagccatgaaattaaaatcaaaaatcggacatataaaacaagtt
gaaccaggtgtaggaataagttatggactaaaatacacaactacaggtaaagaaacaata
gctacagttccaataggatacgcagatggatttactagaatccaaaaaaatccaaaggtt
cttattaagggagaagtgtttgatgtagttggtagaatatgtatggatcaaataatggtt
agaattgacaaagatatagacataaaagttggagatgaggttatactatttggagaaggc
gaagttacagctgagcgtatagctaaagacttaggaactataaactatgaagtgttatgt
atgatatcaagaagagttgaccgtgtttatatggaaaataatgagcttgtacaaataaac
agttatttgctaaaataa
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