Cryptococcus deuterogattii: CNBG_3244
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Entry
CNBG_3244 CDS
T09796
Name
(RefSeq) histone deacetylase 1/2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03082
ATP-dependent chromatin remodeling
cdeu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CNBG_3244
03083 Polycomb repressive complex
CNBG_3244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cdeu03036
]
CNBG_3244
Enzymes [BR:
cdeu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CNBG_3244
Chromosome and associated proteins [BR:
cdeu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
CNBG_3244
HDAC complexes
Sin3A-HDAC complex
CNBG_3244
BRAF-HDAC complex
CNBG_3244
REST complex
CNBG_3244
SHIP complex
CNBG_3244
MiDAC complex
CNBG_3244
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
CNBG_3244
Heterochromatin formation proteins
Other heterochromatin formation proteins
CNBG_3244
Chromatin remodeling factors
NuRD complex
CNBG_3244
BRITE hierarchy
Motif
Pfam:
Hist_deacetyl
NIL
Motif
Other DBs
NCBI-GeneID:
88179540
NCBI-ProteinID:
XP_062883220
LinkDB
All DBs
Position
1:complement(899152..901649)
Genome browser
AA seq
619 aa
AA seq
DB search
MGRNSTMPFSVATYPPLDFSSVRSDGRRVAYYYDHDVGNYHFGLGHPMKPHRIRMTHNLV
VNYGLADDPETMEEEGKRKVNAQMGMENDEARWVNAELRGSRGKRMQIFRPRRATKTDMT
RFHTDEYIELLESVLPENVDALTGNGSRGLTGSDCPAVEGIFEFSSISAGGSIGAAEKLN
EGAADIAINWAGGLHHAKKTEASGFCYVNDIVLGILELLRVNSRVLYIDIDVHHGDGVEE
AFYSTDRVMTCSFHLFGNFFPGTGALKDTGLGKGKGYAVNVPLREGITDEGFHSIFKPVI
AEIMEHYRPSVIVLQGGADSMSGDKLGRLNLSDKGHAECARFLRTFNVPLMLLGGGGYTT
KNVARAWTRETAIACGQELSEDLPSNQYMEYYGPRYKLEVLPSNVEDFNTPEYLADLKRQ
ISNHLKNLPFAPSAQMRQVTGRNVSQAVGLSNGWETDDPEDQIDQRLKILFASKNFNGTY
TQESDTSLNDLTSASRIRRQGGFKTLPRSSVVFDRARKRYFEEDVGMEEDPCCHLPAMIG
KGKNRKSAMSESLTPPTSAPEWRSHLSVHEMRKRPHLAETLQQLSPGSEDECDRNRRITE
NSQLHMIGQLRRKRSFFLS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggggcgaaactccaccatgcctttttctgttgctacgtatcctccgctcgacttctcg
tccgttcgctcagacggccgtcgcgtggcttactactatgatcacgacgtaggcaactac
cattttggacttggccatccaatgaagcctcatcgaattagaatgacgcataaccttgta
gttaactatggattggctgacgaccctgaaactatggaggaagagggcaaaaggaaggtg
aatgctcagatggggatggagaatgatgaagcgagatgggtgaacgccgagctgcgaggg
tcaaggggaaaacggatgcagatatttagacctcgtcgagcaaccaaaacagatatgacg
agatttcacacagatgagtacattgagctgcttgagagcgtactacccgaaaatgtggat
gctctcactgggaatgggtcacgaggcttgacgggatccgattgcccggcagtcgaaggt
atattcgaattcagctctatttctgcaggtggatccattggtgctgctgagaagctcaat
gagggtgcagccgatatcgcaattaactgggcaggtggcctacatcacgccaagaagact
gaagccagtgggttttgctacgtcaatgatattgtccttggtattctcgagcttttgcga
gttaactcgcgggtgctctacatcgatatcgatgtgcatcacggcgacggagttgaagaa
gcgttttactccacagacagagttatgacttgttcttttcatctctttggaaacttcttt
ccaggaactggggcactcaaggataccggcctgggtaagggtaaaggctacgccgtcaat
gttccattgagagaaggtatcacagacgaggggtttcacagcatctttaaacctgttatt
gccgagatcatggaacattaccgtccaagtgtcattgtattacaaggtggagcagacagt
atgtctggagacaagttagggaggttgaacctgtcggacaaaggtcatgctgaatgtgca
aggtttttgaggactttcaatgtaccattgatgttacttggtggcggggggtatacgaca
aaaaatgtggcaagggcgtggactagagaaacagcaatcgcatgtggacaagaattatcg
gaagatttaccaagcaaccaatatatggaatattacgggcctcgatacaaattagaagtg
ttgccttccaatgttgaagatttcaatacaccagaatatctcgctgatctcaagcgtcag
atctccaaccacttgaagaatcttcctttcgctcctagcgctcagatgcgacaagttacc
ggtagaaatgtgagtcaagcagtaggactcagcaatgggtgggaaacagacgatccggag
gatcaaattgatcagaggctcaaaatactatttgcaagtaagaattttaacggtacttac
actcaagagagcgatacttcattgaatgacttgacaagcgcttcaagaattaggcgccaa
ggtggtttcaaaacacttcctaggtcttcagtagtgtttgacagagcgaggaaaaggtac
tttgaagaagatgttgggatggaagaagatccttgttgtcatctgccagccatgattggc
aaaggaaagaataggaaatcggcgatgagcgagagtttaacacctccaacatcagcgcca
gagtggcggtcacatttaagtgtgcatgaaatgagaaaaagacctcatctcgctgagacc
cttcagcaactatcaccaggaagtgaggacgaatgtgatcgaaaccgtcgtatcaccgag
aactcgcagctgcatatgatagggcagctcaggaggaaaaggagtttctttttgagctaa
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