Camelus dromedarius (Arabian camel): 105085052
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Entry
105085052 CDS
T04642
Symbol
COL19A1
Name
(RefSeq) collagen alpha-1(XIX) chain isoform X1
KO
K24340
collagen type XIX alpha
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
105085052 (COL19A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cdk00536
]
105085052 (COL19A1)
Glycosaminoglycan binding proteins [BR:
cdk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105085052 (COL19A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
105085052
NCBI-ProteinID:
XP_010973579
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All DBs
Position
8:complement(3891683..4215191)
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AA seq
1141 aa
AA seq
DB search
MTRGSSWKLWLWAALLLLPASASVTVRDKTEKQCPLLRTEGHQFTEDNRDKLEVSGFDLG
ESFSLRRVFCEGDKTCFKLGSSLLIRDTMKIFPKGLPEEFAIAATFRVRRSTKKERWFLW
QVLNQQNVPQVSVVVDGGKKVIEFMFQATEGDVLNYVFKTRELRPLFDRQWHKLGIGVQA
QGISLYVDCNLVASRHTDIKDAVDFRGRTVIVARAADGKPVDVELHQLKIYCNSDIIAQE
SCCEISDTKCPEQDGFGRPASSPSVPAHASRMSAYLPAKQDLTDQCQCIPSKGEAGLPGA
PGSPGQKGDKGEQGENGPRGAPGLPGQKGEQGFEGSKGEIGEKGEQGEKGDPGLAGVNGQ
DGLKGDLGPRGPPGPKGEKGDMGPPGPPAFTGSLGIQGPQGPPGKEGQRGRRGKTGPPGK
PGPPGPPGPPGIQGLQQTLGEYYLKGNLGEHGAGGPKGEKGETGPPGFPGSIGPKGEKGE
SGEPFTKGEKGDRGEPGITGSQGIKGEPGDPGPPGTIGSPGLKGHQGPAGPMGPRGPPGN
IGLPGEHGIPGKQGTKGEKGDPGGIIGPPGLPGPKGDAGPSGKSLPGEPGLDGNPGAPGP
RGPKGERGLPGVHGSPGDKGPPGIGIPGRTGSQGPAGKPGIQGPRGLPGLPGTPGTPGND
GAPGRDGKPGPPGPPGDPIALPLLGDIGALFKNFCGNCQASVPGLKSNKGEDAGTGEPGK
FDSVAHKGDTGPRGPPGIPGREGPKGSKGERGYPGIPGEKGDEGLQGIPGVPGAPGPTGP
PGLLGRTGLPGPMGTKGDKGSEGPPGRPGPPGPPGVPFNEGNGMSSLYKIQGGVTVPSYP
GPPGPPGPKGDPGPVGEPGAMGLPGLEGFPGIKGDRGPAGPPGMAGISGKPGAPGPPGIP
GEPGERGPVGDIGFPGPEGPEGKPGINGKDGLPGAQGIMGKPGERGPKGERGDQGIPGDR
GPQGERGKPGLQGMKGTIGPVGPPGNKGSVGPPGHQGPPGHPGLPGSPADVVSFEEIKKY
INQEVLRIFEERMAVFLSQLKLPAAMLAAQAHGRPGPPGKDGLPGPPGDPGPQGYRGQKG
ERGEPGIGLPGSPGLPGTSAPGLPGSPGAPGPQGPPGPSGSCNPEDCLYPVSHARQRTSG
K
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgacacgtggcagctcttggaaactctggctctgggcagccctgctgctgcttcctgct
tccgcttctgtgacggtcagggacaagacagaaaagcaatgtcctctactgagaacagag
ggacatcagtttacagaagacaacagagacaaactggaagtttcaggtttcgacctaggg
gagagcttctctctgagacgtgtgttttgtgaaggcgataaaacctgcttcaaattggga
agttcgcttcttattagagacaccatgaagatatttcccaaaggtcttcctgaggagttt
gccatagcagccacgtttcgggtacgaagaagcaccaaaaaggaacggtggtttctgtgg
caggttttaaaccagcagaatgtgccacaggtttctgtagtcgtggatggtggaaagaag
gtgatagaatttatgttccaagctaccgagggagacgtgttgaactacgtttttaaaact
cgagaactccgtcctttgttcgatcgtcagtggcataaacttggcatcggtgtacaagcc
cagggcatttcactctacgtggactgcaacttagttgccagccggcatactgacataaag
gatgctgtggactttcgtggaaggactgtcattgtggcccgagctgcggatggcaaacct
gtggatgttgaacttcaccagcttaaaatctactgtaactcagacatcatcgcccaagaa
tcatgttgcgagatctcagacactaagtgcccagagcaggatggctttggacgtcctgcg
tcatcaccatcagtacccgctcatgccagtagaatgtctgcatatctgccagccaagcag
gacctcacagaccagtgccagtgcatccccagcaagggagaagcaggattaccgggagct
ccgggctcacctggccagaaaggggacaaaggagaacagggtgaaaatggtccacgtgga
gctccaggcttacctggtcaaaagggagagcaaggttttgaaggcagcaaaggagaaatt
ggtgaaaagggtgaacaaggagaaaagggagatccaggtttggccggtgttaatggacaa
gatggtttgaaaggtgacttgggtcctcgcggtccacctggcccaaaaggagaaaaggga
gatatgggccctccaggaccaccagccttcactggttccctggggatacaaggcccccaa
ggtccacctggaaaagagggtcagaggggaagacggggaaaaacaggtcctccaggaaaa
ccgggacctccaggaccacctggacctcctggaatacaaggattacaacagactcttggc
gaatattatctcaagggaaaccttggtgagcatggagctggtggcccaaaaggagagaag
ggtgaaactggaccaccaggatttccaggatccattggccctaaaggtgaaaaaggagaa
tctggggaaccctttaccaaaggtgaaaagggagacagaggagaacctggtataacagga
tcacagggaataaagggcgagcctggagatcccggtcctcccggtacaataggaagccca
ggactaaagggtcatcaaggacctgcaggccctatgggacccagaggaccaccaggaaat
attggattgccaggagaacacggtatcccaggaaaacaaggcactaaaggagaaaaggga
gatccaggtgggatcataggccctcctggacttccaggtccaaaaggtgatgctggtcct
tcaggaaaaagcctgcctggggaaccaggattagatggaaatcctggagcacctggtcca
cgagggccaaagggggaaagaggactgccaggtgtccacggttccccaggtgacaaaggc
cccccagggataggaattcctggccggacgggctcccaaggaccggctggaaagccaggc
attcagggtcctcgaggtctccctgggttgccaggaactccagggaccccagggaatgat
ggagctccaggaagagatggaaagccaggtccaccaggccccccaggtgacccgattgca
cttcctctcttgggagacatcggggccttgttcaagaacttctgtggcaactgccaagcc
agtgtccctgggctgaaaagcaacaaaggagaagatgcaggcactggtgagcctggaaag
ttcgattctgtagcccacaagggtgatacagggccacggggtcctccaggaatcccaggc
agagagggaccaaaggggagcaaaggagagcgcggctaccccgggatccctggggagaaa
ggcgatgagggccttcaaggaattccaggcgtcccaggtgcccctggcccaactggaccc
cctggcttattgggaagaactgggcttcctggtcccatgggaacaaagggtgacaagggc
agcgagggaccccccgggagacccggaccacctggaccacctggtgtaccattcaatgaa
gggaatggaatgagcagtttatataaaatccagggaggtgtgactgttcccagttaccca
gggccccccggaccccctggcccaaaaggcgatcccggtccagtgggagaacctggtgcg
atggggttgccaggactggaaggatttccaggcataaagggagaccgaggcccagcaggt
cccccagggatggccgggatatcgggaaaacctggagccccagggcctccaggaattcca
ggagaaccgggggaaagaggtcctgttggagacataggtttccctggacccgaaggaccc
gaaggaaagcccggaataaatggaaaagatggattaccaggtgcacagggcatcatgggt
aaacctggagagagaggccccaaaggagaacggggtgatcagggaattccaggagacaga
ggcccacaaggtgaacgagggaagccaggccttcaaggcatgaaggggaccataggtcct
gtggggcccccaggaaacaagggctccgtgggaccccccgggcaccaaggccctccgggc
cacccaggcctgcccggctctccggctgatgtggtttcatttgaagaaataaagaagtac
attaatcaagaggttctgaggatttttgaagagaggatggctgtgttcctgtcccagctc
aagctaccagcagcaatgttggctgcccaggcccatgggaggcctggtccgccaggaaag
gatgggttacctgggccaccaggagaccctggccctcaaggctaccgaggacagaaggga
gaaagaggggagcctggaattgggcttccggggagtccgggtcttcctgggacttcagct
ccgggcttgcctggctcaccaggtgctccagggccccagggccccccgggccccagtgga
agttgtaaccccgaggactgcctctatcctgtctctcatgcccgtcagcggacaagtggg
aagtaa
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