Camelus dromedarius (Arabian camel): 105100945
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Entry
105100945 CDS
T04642
Symbol
ARID1B
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03082
ATP-dependent chromatin remodeling
cdk04714
Thermogenesis
cdk05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105100945 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
105100945 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
105100945 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdk03000
]
105100945 (ARID1B)
03021 Transcription machinery [BR:
cdk03021
]
105100945 (ARID1B)
03036 Chromosome and associated proteins [BR:
cdk03036
]
105100945 (ARID1B)
Transcription factors [BR:
cdk03000
]
Eukaryotic type
Helix-turn-helix
ARID
105100945 (ARID1B)
Transcription machinery [BR:
cdk03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105100945 (ARID1B)
Chromosome and associated proteins [BR:
cdk03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105100945 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
105100945
NCBI-ProteinID:
XP_031312466
LinkDB
All DBs
Position
8:71401008..71780406
Genome browser
AA seq
2224 aa
AA seq
DB search
MAHNRSAAAAAGSTNSAKSGGSEAALKEGGSAAALXSSSAAAAASPSSSGPGSAMRRALX
NHKLKTVGEAPPHRPTSSHPNHXHAHHHHHHAPPHHHHHRTTAADKQFQQAQQQTAGSRQ
QHTHFQQQQQSSAARAAAPLAQSDMEQPQHGGAKDSAAGSQADPPGQPXLCKPGDEDDAP
PKMGEPXGGPVREAGLGARGAQQPPVAVPGGGSGGGPAAVXEFSNYYGSAAPASGGPGAR
AGPCFDQXGGQQSPGMGMMNSAQPPPEPPNSMDPLQNXHEGYPNSQYNHYPGYSRPARAA
GRAGGGGGGGGGGERRRRGGGGGGGGERRGAVGXEEGRRTLAAAGGGAGYGGSSSGYGVL
SSPRQQGGGMMMGPGGGGGXRLSKAAAGAAAGGSSGCGQNQTPVGAXPTLNQLLTSPSPM
MRTTAAAXPDYSSPGGRGRQPSPGAAGGGGGGRGGGQQAAAGXGLGKDMGAQYAAASPAW
AAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSY
GPPGPQRYPIGIQGRTPGAMGGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYNQQPQPPHL
PQQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSG
SIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSP
VGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMS
QYGPQQTGPSMSPHPSPGGQVHPGISSFQQSSSSGTYGAQMSQYGPQGNYSRPPTYSGVP
SASYSGPGPGMGINANNQMHGQGPSQPCGAMPLGRMPSAAMQNRPFPGNMSSMTPSSPGM
SQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGGFPGMNQTGLMASSSPYSQPM
NNSSGLMNTQAPAYSMTPNMVNSSTASMGLADMMSPGESKLPLPLKADGKEEGTAQPESK
SKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRL
YVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPP
PEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQM
TPMQGGRSSTVSVHDPFSDASESSFPKRNSMTPSAPYQQGMSMPDVMGRMPYEPNKDPFG
GMRKVPGSSEPFMTQGQMATSSMQDMYNQSPSGAMSSLGLGQRQQQQFPYGASYDRRHEP
YGQQYPGQGPPSGQPPYGGHQPGLYPQQTNYKRHMDGMYGPPAKRHEGDMYSVQYGSQQQ
ELYNQYGSSYSGPDRRPIQGQYPYPYNRERMQGPGQMQPHGLPPQMMGGPMQSSSSEGPQ
QSMWATRNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDMMVPDQRMNHESQWPSHVSQRQP
YMSSSASLQPITRPPQSSYQTPPSLPNHISRAPSPASFQRSLESRMSPSKSPFLPSMKMQ
KVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRVMM
SLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEY
EVGDPGQKALDHSAVKREDSQSLADDSGKEEEDAECIEEEEDEEEDEEEDGGKTETEDRS
STAVTAADPKEKPRQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFSSGLLHWQLGGGD
TTEHIQTHFESKIEIPPRRRPPPPLSSTGRKKEQEGKGDSEEQQEKSIIATIDDVLSARP
GALPEDANPGAQTESSKFPFGIHQAKSHRNIKLLEDEPRSRDEAPLCTVAHWQDSLAKRC
ICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGV
ACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQD
PFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNP
VCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPP
PLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQ
IGQL
NT seq
6675 nt
NT seq
+upstream
nt +downstream
nt
atggcccataaccggagcgcggcggccgccgccggcagcactaacagcgccaagagcggc
ggctccgaggcggctctcaaggagggtggaagcgccgccgcgctgntctcctcctccgcg
gcggcggcggcatctccttcctcgtcgggcccgggctcggccatgagacgggcgctcnnc
aaccacaaactgaaaaccgttggcgaagccccgccgcaccgccccaccagcagccacccc
aaccacnnccatgcccaccaccaccaccaccatgccccaccccaccaccaccaccaccgc
actacagcagcagataaacagttccagcaggcacagcagcaaacagcaggcagcagacaa
caacatacccatttccaacaacaacaacagagctcggcggcgcgggcggcggcaccgcta
gcccagtcggacatggagcagccgcaacatggaggcgccaaggacagtgccgcgggcagc
caggccgaccccccgggccagcccnntctgtgcaagccgggcgacgaggacgacgcgccg
cccaagatgggggagccgnngggcgggccggtacgagaagccggcctgggcgcccggggc
gcgcagcagccgccggtcgccgtgccgggcggcggcagtggcggcggcccggctgccgtc
ntggagtttagtaattactatggcagcgctgcccctgctagcggcggccccggggcccgc
gctgggccttgctttgatcaanatggcggacaacaaagccccgggatggggatgatgaac
tccgctcagccgccgccggagccccccaacagcatggaccccctgcagaacntccacgaa
gggtaccccaacagccagtacaaccattatccgggctacagccggccagcgcgggcggcg
ggcagggcggggggcggtggaggaggaggaggaggtggagagaggaggaggagaggagga
ggaggaggaggaggaggagagaggaggggagctgtggggnaggaggaagggcggcggacg
ctagcagcagcaggaggcggggcgggctatgggggctcgtcctcggggtacggggtgctg
agctccccccggcagcagggcggcggcatgatgatgggccccgggggcggcgggggcncg
cgcctcagcaaggcggccgccggcgcggcggcagggggctccagcggttgcgggcagaac
cagacacccgtcggggccnacccgaccctcaaccagctgctcacctcgcccagccccatg
atgaggactacggcggcagctnnacctgactacagcagcccaggggggcgcggtcgccag
cccagtccaggggcggcgggcggcggcggcggggggcggggcgggggccagcaggcggcc
gcgggcnatggcttgggcaaggacatgggcgcccagtacgctgctgccagcccggcctgg
gcggccgcgcaacaaagaagccacccggcgatgagccccggcacccccggcccgaccatg
ggcagatcccagggcagcccaatggatcccatggtgatgaagagacctcagctgtatggg
atgggcagcaaccctcattctcagccacagcagagcagcccttacccgggaggctcctac
ggccccccaggcccacagcggtaccccattggcattcagggtcggaccccaggggccatg
ggaggaatgcagtacccacagcagcagatgccgcctcagtatggacagcaaggcgtgagt
ggttactgccagcagggccagcagccttactacaaccagcagccgcagcctccgcacctc
ccccagcaggcgcagtacctgccatcccagtcccagcagaggtaccagcctcagcaggac
atgtctcaggaaggctatggaactaggtctcaacctcctctggctcccggaaaacctaac
catgaagacttgaacttaatacaacaagaaagaccatcaagtttaccagatctgtctggc
tccatcgatgacctccccaccggaacggaagcaactttgagctcagcagtcagtgcatcc
gggtccacgagcagccaaggggatcagagcaatccggctcagtcgcctttctctccgcat
gcatctccccacctctccagcatccctgggggcccatcgccttctcctgtcggctctcct
gtaggaagcaaccagtcccgatctggcccaatttctcctgcaagtattccaggcagtcag
atgcctcctcagccacctgggagccagtcagaatccagttcccatcctgccttgagccag
tcaccaatgccacaggaaagaggttttatggcaggcacacaaaggaacccgcagatgtct
cagtacggacctcaacagacaggaccgtccatgtcgcctcatccctctcctggaggccag
gtgcatcctggaatcagcagctttcagcagagtagctcaagtgggacctacggtgcacag
atgagccaatatggaccacaaggtaactactccagacccccaacgtatagtggggtgccc
agtgcaagctacagcggcccagggcccggcatgggcatcaatgccaacaaccagatgcat
ggacaagggccaagccagccatgtggtgctatgcccctgggacgaatgccatcagctgca
atgcagaacagaccgtttcctggaaatatgagcagcatgacccccagttctcctggcatg
tctcagcagggagggccaggaatggggccaccaatgccaaccgtgaaccgtaaggcacag
gaggcagctgccgcagtgatgcaggccgctgcaaactcggcacaaagcaggcaaggcggc
tttcccggcatgaatcagactggactcatggcttccagctctccctacagccagcccatg
aacaacagctctgggctgatgaacacccaggcgcccgcctacagcatgacgcccaatatg
gtgaacagctcaacagcatctatgggtcttgcagatatgatgtctcctggtgaatccaaa
ctgcccctgcctctcaaagcagacggtaaagaagaaggcactgcccagccggagagcaag
tcgaagaagtccagctcatctaccaccactggggaaaagatcacaaaggtatacgagttg
gggaatgagcccgagaggaagctatgggtcgaccgatacctcaccttcatggaggagaga
ggctccccggtctcaagcctgcctgcagtgggcaagaagcccttggacctgttccggctc
tatgtctgcgttaaagagattggaggtctggcacaggttaataaaaacaagaagtggcgt
gagctggcaaccaacctaaatgttggcacttcgagcagtgcagcaagctccctgaagaag
cagtatattcagtacctgtttgcctttgagtgcaagattgagcgaggggaggagcccccg
ccggaagtcttcagcacgggagacaccaagaagcagcccaagctccagccgccatctcct
gctaactcaggatccctgcaaggtccacagacgccccagtcaactggcagtaattcaatg
gcagaggttccaggtgacctgaagccacccacaccagcctccacccctcatggacagatg
accccaatgcaaggtggaagaagcagcaccgtcagtgtccacgacccattctcagacgca
agtgagtcatcgttcccaaaacgcaactccatgaccccgagtgccccataccagcagggc
atgagcatgccagacgtgatgggcaggatgccctatgagcccaacaaggacccctttgga
ggaatgagaaaagtgcctggaagtagtgagccgttcatgacgcaaggacagatggccacc
agcagcatgcaggacatgtacaaccaaagtccgtctggagcgatgtccagcctgggcctg
gggcagcggcagcagcagcagttcccctacggagccagctacgatcgaaggcatgaacct
tatgggcagcagtacccaggccaaggccccccctcgggacagccgccatatggagggcac
cagccaggcctgtatccgcagcagacgaattacaagcgccatatggacggcatgtacggg
cctccagccaagcgccacgagggggacatgtacagcgtgcagtacggtagccagcagcag
gagctgtacaaccagtacgggagctcctactccgggccggacaggcggcccatccagggg
cagtatccctacccctacaacagagagaggatgcagggccccgggcagatgcagccgcac
gggctcccgccccagatgatgggcggcccgatgcagtcgtcctccagcgaagggcctcag
cagagcatgtgggcgacacgcaacgatatgccttatccataccagaacaggcagggcccc
ggtggtcccgcacaggcacctccttatccaggcatgaaccgcacggatgatatgatggta
cctgatcaaaggatgaatcacgagagccagtggccttctcacgtcagccagcgtcagcct
tatatgtcctcctcagcctccctgcagcccatcacacgcccacctcagtcatcctaccag
acgccaccgtcactgccaaaccacatctccagagcgcccagccccgcctccttccagcgc
tctctggagagtcgcatgtctccaagcaagtcccccttcctgccctccatgaagatgcag
aaggtcatgcccaccgtccccacgtcccaggtcacggggccgcccccccagccaccccca
atcagaagggagattacctttcctcctggctctgtggaagcatcacagccagtcttgaaa
caaaggcgaaagattacctcaaaagatatcgttactcctgaggcctggcgtgtgatgatg
tcccttaaatcaggtcttttggctgaaagtacttgggctttggacactattaacattctc
ctgtatgatgacagcactgtcgctactttcaacctctcccagttgtccggatttctcgaa
cttttagtagagtactttaggaaatgcctgattgacatttttggaattcttatggaatat
gaagtgggagaccctggccaaaaagcacttgatcacagtgcggtgaagagagaggacagc
cagtccttggctgacgattctgggaaagaggaggaagatgctgaatgtattgaggaggag
gaggacgaggaggaggatgaggaggaggatggtgggaagactgagaccgaggaccggagc
agcacggctgtgaccgctgcagatccaaaggagaagcccaggcaagctagtaagtttgac
aagctgccaataaagatagtcaaaaagaacaacttgtttgtcgtcgaccgatctgacaag
ctgggtcgtgttcaagagttcagcagtggacttctgcactggcagctcggcggtggggac
accaccgagcacatccagactcactttgagagcaagattgaaattcctcctcgcaggcgt
ccacctccccctttaagctccacaggtagaaagaaagagcaagaaggaaaaggggattct
gaggagcagcaagagaaaagcatcattgcaaccatcgatgatgtcctgtctgcccggcca
ggggctctaccagaagacgcaaaccctggtgcccaaaccgaaagcagtaagtttcccttt
ggaatccatcaagccaaaagtcaccgcaacatcaagctgctggaggatgagccaaggagc
cgggatgaggctccgctctgcaccgtcgcgcactggcaggactcgctggctaagcgctgc
atctgtgtgtcgaatatcgtccggagcttgtcttttgtgcctgggaatgacgccgaaatg
tccaaacatccaggcttggtgctgatcctggggaagctgattcttcttcaccacgagcat
cccgagaggaaacgggcgccgcaaacgtatgagaaggaggaagacgaggacaaaggggtg
gcctgcagcaaagatgagtggtggtgggactgcctcgaggtcttaagggataacacgttg
gtcaccttggccaacatttctgggcagctagacttgtctgcttacacggaaagcatctgc
ttgccaattttggatggcttgctgcactggatggtgtgcccgtctgcggaggcacaagac
ccctttccaactgtgggacccaactctgtcctgtcgcctcagagacttgtgctggagact
ctctgtaaactcagcatccaggacaataatgtggacctgatcttggccacgcctccattt
agccgtcaggagaaattctatgccacgttagttaggtacgttggggatcgcaaaaaccca
gtctgtcgagaaatgtccatggcgcttttatcgaaccttgcccaaggggatgcgctggct
gcaagggcgatagctgtgcagaaaggaagcattggaaacttgataagcttcctggaggat
ggggtcacaatggcccagtatcagcagagccagcataacctcatgcacatgcagcccccg
cctctagagccccctagcgtggacatgatgtgcagggcggccaaggctctgctggccatg
gccagagtggacgagaaccgctcagagttccttctgcacgagggtcgattgctggatatc
tcgatatcagccgtcctgaactctctggttgcgtctgtcatctgtgatgtactgtttcag
attgggcagttatga
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integrated database retrieval system
