Clostridioides difficile R20291: CDR20291_0546
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Entry
CDR20291_0546 CDS
T00998
Name
(GenBank) putative phage-related regulatory protein
Organism
cdl
Clostridioides difficile R20291
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Gene cluster
GFIT
Motif
Pfam:
Phg_2220_C
HTH_23
HTH_24
MarR_2
HTH_29
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CBE02416
UniProt:
A0A9R0BIE2
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Position
663506..664759
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AA seq
417 aa
AA seq
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MGEIEMNKGFYKLNSVVLNFDIKNDVNKIRFNHYIMRKENIQRLQGTLPNGQFYMTVRRA
ATDLQLSISTISRLVKEFLDLGIIRLVSKGVKGNRSVYSYVSIEFNGSLFDDSKYMELDC
VCNDEFIDNSGIEFDCDSKDNSFNGDINVETVHCINEYFSDDDVEHNYNNFHNKDTIKDK
AISNISTIKKYIDESFDTNKSENSNLQQESINFNFNDTCNEIDKRTNNSIENNQNKRPMR
LSDISVLSDKGMTNKKNYFNHNHGIQKRNKSATKKKESLNKFNKKNIQQSIINMLNKKSG
KNFKIDSPISIKLINERLKEGYVLEDFYKVIEVKVAKWKNTIMEMYIRPETLFSYKFESY
VNENISMKSQSNVHPCKEGNSNDSSNYIHSDYTTYDGSVRERKKYENVRYWNPICEI
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaatagagatgaataagggattttacaaattaaattcagtggtattgaacttt
gatattaagaatgatgttaacaagataagatttaatcattatataatgagaaaagaaaac
atacaaagacttcaaggaactctgccaaacggacaattttatatgacagtgagaagagct
gctacagatttacaactttctatttctactataagtaggcttgtaaaagagtttttggat
ttagggataataagattagtgtctaagggtgtaaaaggtaatcgttctgtatatagttac
gtaagtatagagtttaatggaagtttatttgatgatagcaaatatatggaacttgactgt
gtatgtaatgatgaatttattgataatagtggcatagagtttgattgtgatagcaaagat
aattcttttaatggagatataaatgtagaaactgtgcattgcattaatgagtatttctct
gatgatgatgtagagcataattataacaatttccataataaagatactataaaggataaa
gccatttctaatattagcactatcaaaaaatatattgatgaatcttttgatacaaataaa
tcagaaaattctaacttacaacaggagtcaataaatttcaactttaatgatacatgcaat
gaaatagataaaagaacgaataatagtatagaaaataatcaaaataaaaggcctatgaga
ttgagtgacatcagtgttttaagtgataaaggtatgacaaataaaaagaattactttaat
cataatcatggtatacaaaaaaggaataaatctgcaacaaagaaaaaagaatccttaaat
aaatttaataaaaaaaatatacagcaaagcattataaatatgctaaataaaaaatcaggt
aagaattttaaaatcgattctccaataagcataaaacttatcaatgaaaggctaaaggag
ggctatgtcttagaagatttctataaagttattgaggtaaaagtggctaagtggaaaaat
accataatggaaatgtatataagaccagaaaccttgtttagctataagtttgaatcctat
gtaaatgaaaacatatctatgaaaagtcaaagtaatgttcatccatgtaaagaaggcaat
agtaatgatagcagtaattatatacattctgattatacaacatatgatggcagtgtgcgt
gagagaaaaaaatatgagaatgtaagatactggaatcctatatgtgaaatttaa
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