Clostridioides difficile R20291: CDR20291_1255
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Entry
CDR20291_1255 CDS
T00998
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00470
D-Amino acid metabolism
cdl00550
Peptidoglycan biosynthesis
cdl01100
Metabolic pathways
cdl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CDR20291_1255 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CDR20291_1255 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CDR20291_1255 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cdl01011
]
CDR20291_1255 (ddl)
Enzymes [BR:
cdl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CDR20291_1255 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
cdl01011
]
Precursor biosynthesis
Amino acid ligase
CDR20291_1255 (ddl)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
RimK
ATP-grasp
CPSase_L_D2
ATPgrasp_ST
GARS_A
ATP-grasp_4
DUF677
Motif
Other DBs
NCBI-ProteinID:
CBE03671
UniProt:
A0A9R0CE55
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All DBs
Position
complement(1488170..1489069)
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AA seq
299 aa
AA seq
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MKIAVIMGGISSEREVSLNSGKEIYNNLDKNKYEVVKVIIDDKKDIFTKIPEDIDFAILA
LHGKFGEDGCIQSILETMDIPYSGCGPLCSGMCMDKNITKKMLRDSNLPTAPWVLVKSVD
EIDYDEIDNIGYPVFIKPNSGGSSVATFFIHSKDEVEEAVRKGLEVDEFVMIEKYIPGGE
YTSFILNGEVFPTISIKSDSGFFDYEAKYSVEKGAKEEVVYLDEELQKRVNEISETCWKI
FNCKAYVRVDMIISEGIPYVLELNTLPGMTQTSLIPRSAAARGIKYSELLDKLIEYSLN
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcagttataatgggtggaatatcatcagagagagaagtttctttaaattca
ggaaaagagatatataataaccttgataaaaataaatatgaagttgtaaaagtaataata
gatgataaaaaagatatatttacaaagataccagaagatatagattttgcaatacttgct
ttacatggaaaatttggtgaagatggatgtattcaatcaatacttgagactatggatata
ccatactctggatgtggacctctttgcagtgggatgtgtatggataaaaatataactaaa
aaaatgcttagagattcaaacctacctactgctccatgggttttagtaaaatcagttgat
gaaatcgactatgatgaaatagataatataggttatccagtatttataaaaccaaactca
ggaggttcaagtgtagccacattctttattcattctaaggatgaagttgaagaagcagtt
agaaaaggtctggaagttgacgaatttgtaatgattgaaaaatatataccaggtggagaa
tatacttcattcatattaaatggagaagtgttccctacaatatctataaaatctgattca
ggattctttgattatgaagctaaatactcagttgaaaaaggtgcaaaggaagaagttgtt
tacttagatgaagaacttcaaaaaagagtaaacgaaatttctgagacttgttggaaaatt
tttaattgcaaagcatatgtaagagttgatatgattataagtgaaggtattccatatgtt
cttgaactaaatactcttcctggaatgactcaaactagtttaattcctagaagtgctgct
gctagaggtattaagtacagtgaactattagataaacttatagaatactctttaaattag
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