Clostridioides difficile R20291: CDR20291_1895
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Entry
CDR20291_1895 CDS
T00998
Name
(GenBank) putative peptidase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00300
Lysine biosynthesis
cdl01100
Metabolic pathways
cdl01120
Microbial metabolism in diverse environments
cdl01230
Biosynthesis of amino acids
Module
cdl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CDR20291_1895
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cdl01002
]
CDR20291_1895
Enzymes [BR:
cdl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
CDR20291_1895
Peptidases and inhibitors [BR:
cdl01002
]
Metallo peptidases
Family M20
CDR20291_1895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
CBE04796
UniProt:
A0A9R0BKU3
LinkDB
All DBs
Position
complement(2211734..2213080)
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AA seq
448 aa
AA seq
DB search
MKEQIKEKVNSLQDEMISSIQESVKIPSVISEATENCPFGENVDKALRGILDLCKSLGFK
TVYKDGYYGYAEIGQGEKMIGILGHVDVVPEGDLESWNYPPFEAVLEDGKLYGRGTQDDK
GPTISAIYAVKALMDLNVDFNKRIRFIFGADEENLWRCINKYKENNEEIPNYGFTPDSRF
PITNAEKGLLQVHLTCDSKSDIELSVGKALNAVPGKAIYIGKYSDKLKKELDKLNFEYTV
EGNKICIIGKSVHSAASDTGINAVARLCIALNNIGIDSNIIKFLAEVIGEDANGNNIIPN
CKDDVSGKLTVNIGRVTIDNEKEFAGIDVRIPVTYKKDDFVKELKKMTDKYNLNYEEYDF
LDSIYVPEDTLLVKTLRKVYEEETGLDGTPLSSGGATYARALDNCVAFGAIFPGKPETEH
QANEYLIVEDIIKATQIYALSIYELLKI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagcaaattaaagaaaaagtaaattctctacaagatgaaatgatttcttcaata
caagaaagtgtaaaaatacctagtgttatatctgaagcaactgaaaattgcccatttggt
gaaaatgtagataaagctttaagaggtatattagacttatgtaaatctttaggatttaag
acagtatacaaagatggatattatggatatgcagaaataggacaaggtgaaaaaatgata
ggtatacttggtcacgttgatgtggttccagaaggtgatttagaaagctggaattaccct
ccatttgaagctgttttagaagatggtaaattgtatggaagaggaacacaagatgataaa
ggacctacaatatcagcaatttatgcagtgaaagctcttatggatttaaatgtagacttt
aataagaggataagattcatttttggggctgatgaagaaaatctttggagatgtataaat
aaatataaagaaaataatgaagaaataccaaactatggatttactccagattctagattc
ccaataacaaatgcagagaaaggtcttttacaagttcatttgacttgtgatagcaaaagt
gatatagagttgtcagttggaaaggctttaaatgcagttccaggtaaagcaatctatatt
ggaaaatactctgataaattaaaaaaagaacttgataaattaaattttgagtatactgtt
gaaggtaataaaatctgtataattggaaaaagtgtccattcagcagcaagtgatactggt
ataaatgcagtggctagactttgtatagctcttaataatataggtatagattctaatata
attaagtttttagcagaagttattggtgaagatgctaatggaaacaatataattcctaat
tgcaaggatgatgtatcaggtaaactaacagtaaatataggtagagtaactattgataac
gaaaaagaatttgcaggaatagatgtaaggattccagtaacatacaaaaaggatgatttt
gtaaaagagttaaagaaaatgacagataaatacaatttaaattatgaagaatatgatttc
ttggattcaatctatgttccagaagatactcttcttgttaagacacttagaaaagtatat
gaagaagaaactggtcttgatggaacaccactttcatctggaggagcaacatacgcaaga
gctttagataattgtgttgcatttggagctatttttccaggaaaaccagaaacagaacac
caagctaatgaatacttaatagtagaggatattataaaagctactcaaatatatgctctt
tctatttacgaattattaaagatttaa
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