Candida dubliniensis: CD36_62020
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Entry
CD36_62020 CDS
T01140
Name
(RefSeq) ATP-dependent RNA helicase, putative
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
cdu
Candida dubliniensis
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cdu03009
]
CD36_62020
Enzymes [BR:
cdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CD36_62020
Ribosome biogenesis [BR:
cdu03009
]
Eukaryotic type
Pre-60S particles
Helicases
CD36_62020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
8048835
NCBI-ProteinID:
XP_002420966
UniProt:
B9WIQ4
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All DBs
Position
6:complement(404413..406125)
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AA seq
570 aa
AA seq
DB search
MSTSASSSYLDDETTWDSFNLDPRLLQAIDQLGFSNPTLIQSSAIPLALEEKRDIIAKAS
TGSGKTAAYCIPIVNNLLTNDSTQGIKSIILVPTRELSNQVFQFIEKLLIFSNNKINILN
LSSSYSDQVLNSLLVNKPEIIISTPAKLIQILEKNEKNIDLTTVKNLTIDEVDLVLSFGY
LDDLKKLESYLPVKKNLQTFLMSATVNDDLDDLKQRYCTKPAILKLNEDAASQNKLVQYY
AKTTEFDKFLLAYVIFKLNLIKGKTIAFVNNIDRGYRLKLFLEQFGIRCCILNSELPINS
RLHIVEEFNKNVYHLLIATDETNELNEEQDEDDDDEGEGEIETKSKKSKKSKFKQDKEYG
VSRGVDFRNVACVLNFDLPTSSKAYIHRIGRTARAGKAGMALSFVLPLSEFGKHKTASLP
SAKKDEKVLRRIVKQQSKNGFEIKPYQFDMKQVEGFRYRADDAFRAVTQTVVREARVKEL
KNELINSEKLKRFFEENPQDLASLRHDKELHPARIQSQLKNVPQYLLPESARSDVKNIGF
VPFHKNKIHKHRKGKGKGRKKVDPLKSFRK
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatcagcatcatcttcgtatttagatgacgaaacaacttgggactcttttaat
ttagatccacgtttattgcaggctattgatcaattggggttttctaatcccacattgatt
caaagcagtgccatcccattggcattagaagaaaaaagggatattatcgctaaagcatca
accggttcaggtaaaactgcagcatattgtattccaatagtgaataatttgttaactaat
gactcaactcaaggtataaaaagtataatattagtaccaactagagaattatctaatcaa
gttttccaatttattgaaaaattattgatatttagcaataacaagattaatatcttgaac
ttgtcttcaagttatagtgaccaagttttaaactccttgttagttaataaaccagaaata
attatttccacaccagctaaattgattcaaattctagagaaaaacgaaaagaatattgac
ttgaccacagtgaaaaacttgaccattgatgaagttgatttggtgttatcgtttggatat
ttagacgacttgaaaaaattggaaagttatttaccggtaaagaaaaatttgcaaacattt
ttaatgtcggctactgtgaatgatgatttagatgatttaaaacaaaggtattgtactaaa
cctgctatattaaaattgaatgaagatgcagctagtcaaaataagttggtccaatattat
gccaaaacaacagagtttgacaagttcttattagcatatgtgatctttaaattaaacttg
atcaaaggtaaaaccattgcttttgtaaataacattgatagaggatacagattgaaatta
tttttggaacaatttggaattagatgctgcattttgaatagtgagttgcctatcaattcg
agactacacattgttgaagagtttaataaaaatgtttatcacttacttatagcaacagat
gagacaaatgaattaaatgaagagcaagatgaagacgatgatgatgagggtgaaggtgaa
attgagaccaaactgaagaaatcgaaaaagtcaaaattcaaacaagacaaagaatatggt
gtttctcgaggtgtggatttcagaaacgttgcttgtgtgttgaatttcgatttgccaacc
tcttcaaaggcatatattcatagaattgggagaacagcgagagcaggcaaagctggtatg
gcactttcctttgtgttgccgttatctgaattcggtaagcataagactgcatctttacca
agtgcaaagaaagatgaaaaggtcttacgccgtatagtcaagcaacaatcgaaaaacgga
tttgaaatcaagccttaccaatttgatatgaaacaggttgaaggattccgctatcgtgct
gacgatgcattcagagcagtgacccaaactgttgtaagagaggcaagagttaaagaattg
aaaaatgagttgattaattctgaaaaattgaaacgattttttgaagaaaacccacaagac
ttggcaagtttaagacacgataaagagttgcacccagctagaatccaatctcagttgaaa
aatgttccacaatatcttttacctgaaagtgccagactggatgtaaaaaatattgggttt
gttcccttccataaaaataagatacataaacacagaaagggtaagggcaaaggtaggaaa
aaagtagatccattaaaatcatttagaaagtag
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