KEGG   Candida dubliniensis: CD36_80760
Entry
CD36_80760        CDS       T01140                                 
Name
(RefSeq) DNA ligase I, mitochondrial precursor, putative
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cdu  Candida dubliniensis
Pathway
cdu03030  DNA replication
cdu03410  Base excision repair
cdu03420  Nucleotide excision repair
cdu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cdu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CD36_80760
   03410 Base excision repair
    CD36_80760
   03420 Nucleotide excision repair
    CD36_80760
   03430 Mismatch repair
    CD36_80760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cdu03032]
    CD36_80760
   03400 DNA repair and recombination proteins [BR:cdu03400]
    CD36_80760
Enzymes [BR:cdu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CD36_80760
    6.5.1.6  DNA ligase (ATP or NAD+)
     CD36_80760
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CD36_80760
DNA replication proteins [BR:cdu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CD36_80760
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CD36_80760
DNA repair and recombination proteins [BR:cdu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CD36_80760
   NER (nucleotide excision repair)
    Other NER factors
     CD36_80760
   MMR (mismatch excision repair)
    Other MMR factors
     CD36_80760
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 8046806
NCBI-ProteinID: XP_002419024
UniProt: B9WD57
LinkDB
Position
3:complement(168434..170980)
AA seq 848 aa
MYQYCLRFLICDKRESHLEGSCTLLNCFTRKNRVSFFFSNIYILTKHRNCLLPFFFLYSN
RRKVDFLFIINYLHLNSLSYIFMFSRLVSHRYPTGVQLKQANRVMANKKQQSLARFFGGI
APATGSDSPSPKKQQTLTRFFGNSSNNSSPKKATSETKQKRQATPPKSPPPSKKAKIESK
SDELSSSNGDIEMETKPELKINGFGNDIRNEAEQLIKLSESEQAKHGNEKLGVKIPYAKL
ASVFEAIENESSRLAIIAIISQFFLEVLQQSTIDKLIRIVYLCINRLGPDYEPGLELGLG
ETILIKAISECYGRETSKIKADYKSTGDLGLIAQKSRSLQPTMFKTAPLDVDTVFDNSLK
IAKSTGKESQSKKISIIKQMLTACQMKSCEAKFLIRSLQGKLRIGSAEKSIIIGLAQAFV
NYENKSNKKIDASKLTEAEEIMKEAFSRVPNYEVVLKTAYQYGIFNLLEHCFVTPGIPLK
PMLANPTKSIGEVLDRFQNEEFTCEYKYDGVRAQVHILSDGSVKVFSRNLEDMTQTYPDL
ISIGKQFAVDGNTISMILDCEAVAWDREAHKILPFQKLTTRKRKDVNEEDIKVQICLFAF
DLLYYNNESLLPKSLADRRKIMQENLSPIEDRFQFATATNSSSNLEVLQQFLDQSIKDSC
EGLMVKMLNGSDSFYEPSKRSRNWLKLKKDYLEGVGDSLDLVVIGAYNGKGKRTGTYGGF
LLASYNEDSGDLETCCKIGTGFSDEDLLNLYNKLHPTEIASPKNYFVYDTNNSNAVPDVW
FEPSMLFEVLTADLSLSPIYKTGHQEFGKGVSLRFPRFIRVRDDKGVEDATSSSRVCEFY
QRQAHLNN
NT seq 2547 nt   +upstreamnt  +downstreamnt
atgtaccagtattgtttgaggtttttaatatgtgacaaaagagagagtcatctcgaagga
agttgtactttgttgaattgttttacacgtaaaaatcgcgtctctttttttttttcaaac
atatatatccttactaaacacagaaattgtcttcttccatttttttttctttacagtaat
agaaggaaagttgattttctttttattattaattatttacatcttaactcattactgtac
atttttatgttcagtagacttgtatcccatcgatatccaactggtgttcagttaaaacaa
gcaaatagggtcatggcaaataagaaacaacaatcattagctcggttttttggaggtatt
gctcctgccactggttcggattcaccatctcctaaaaaacaacaaacattgacaagattc
tttggtaattcctcaaacaatagtagtccgaaaaaagcaactagtgaaactaaacagaaa
agacaagctacaccacccaaatcgccacccccatccaaaaaagctaaaattgaatcaaaa
tctgatgagttgtcaagtagtaatggcgatatcgagatggaaactaaaccagaattgaaa
attaatgggtttggcaatgatattcgtaatgaagccgaacaattgatcaaactcagtgaa
tcagaacaagctaaacatggtaatgaaaaattgggtgttaaaattccgtatgccaaatta
gcatctgttttcgaggcaattgaaaatgaaagttctcgattagcaattattgccattata
tcacaattttttttggaagttttacaacaactgacaattgataaacttattcgaattgta
tatttatgcatcaatagacttggtcctgattatgaaccaggattggaattaggattaggt
gaaaccattttaattaaagctattagtgaatgttatggaagagaaacatcgaaaatcaaa
gctgattataaatctactggagatttaggattgattgcccaaaaatcaaggagtttacaa
ccaacaatgtttaaaactgctccacttgatgttgatactgttttcgataactcattaaag
attgctaaatcaactggcaaagaatctcaatcgaaaaaaattagtatcatcaaacagatg
ttaactgcatgtcaaatgaaaagttgtgaagccaaatttttaattcgttcattacaaggg
aaattacgaattggactggcagaaaaaagtattatcataggattagctcaagcatttgtt
aattatgaaaataaatctaataaaaaaattgatgcaagtaaattaactgaagctgaagaa
attatgaaggaagcattttcccgtgttcctaattatgaagtagtattgaaaacagcctat
caatatggtattttcaatcttttggaacattgttttgttactcctgggataccgttgaaa
ccaatgttggcaaaccccacaaaatccattggagaagtattggatcgtttccaaaatgaa
gaattcacttgtgaatataaatacgatggtgttagagctcaagttcatatattgtctgat
ggttctgttaaagtattttcaagaaatttggaagatatgactcaaacttatcctgatttg
atctccattggtaaacaatttgcagttgacgggaatacaatttctatgattttagattgt
gaagcagttgcatgggatagagaagctcataagattttaccatttcaaaaattaactact
agaaaacggaaagatgtcaacgaagaagatatcaaagtgcaaatttgtttatttgcattt
gatttattgtattataataatgagtcacttttaccaaaatcattagcagatagaaggaaa
atcatgcaagaaaatttatctccaattgaagatagatttcaatttgccaccgccacgaat
tcatcttcgaatttggaagtgctacaacagtttttggatcaatcaattaaagattcatgt
gaagggttgatggtgaagatgttaaatggactggactcattttacgaaccatcgaaacgt
tcaagaaattggttaaaattgaaaaaagattatcttgaaggtgttggtgattctttagac
ttggtagttattggtgcttataatgggaaaggtaaaagaacaggtacttatggtgggttt
ttattggcttcttataatgaagattcgggagatcttgaaacttgctgtaaaatcggtacc
gggtttagtgatgaggatttacttaatttatacaataaattacatccaacagaaattgca
tccccgaagaattattttgtttatgacaccaacaattcaaatgctgttcctgatgtttgg
tttgaaccaagtatgttgtttgaagttttaacagcagatttatctttaagtcctatttat
aaaacaggacatcaagaatttggaaaaggtgtatcattaagattccctagatttattcga
gtaagagatgataagggtgttgaagatgcaactagttcgagtcgtgtatgtgagttttac
caacgtcaagctcatttaaataattag

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