Dickeya fangzhongdai ND14b: LH89_05865
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Entry
LH89_05865 CDS
T03347
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00020
Citrate cycle (TCA cycle)
ced00190
Oxidative phosphorylation
ced00650
Butanoate metabolism
ced01100
Metabolic pathways
ced01110
Biosynthesis of secondary metabolites
ced01120
Microbial metabolism in diverse environments
ced01200
Carbon metabolism
Module
ced_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ced_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ced_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LH89_05865 (sdhA)
00650 Butanoate metabolism
LH89_05865 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LH89_05865 (sdhA)
Enzymes [BR:
ced01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LH89_05865 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
DAO
Thi4
HI0933_like
FAD_oxidored
FAD_binding_3
BEX
Motif
Other DBs
NCBI-ProteinID:
AIR68759
UniProt:
A0A2K8QKY1
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Position
complement(1360925..1362691)
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AA seq
588 aa
AA seq
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MNLPVREFDAVVVGAGGAGMRAALQISQMGLSCALLSKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGC
TAICIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKVTGQALTVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRSAGMHLQ
ESLAEQGDTRDASDSDVDASLERLNRWNNTRSGEDPVEIRKALQACMQNNFSVFREGDAM
AKGLEELKVIRERLNNARLDDTSSEFNTQRIECLELDNLMETAYATAVSANFRTESRGAH
SRFDYPDRDDENWLCHSLYQPQTESMTRREVNMQPKLRPAFPPKVRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgccagtcagagagtttgatgccgttgtcgtcggtgcgggtggtgccggtatg
cgcgccgcgctgcagatttcccagatgggcctgtcctgcgccctgttgtcaaaagtgttc
ccgactcgttcccataccgtgtccgctcagggcggaattaccgtggcgctgggtaacacc
cacgaggataactgggaatggcacatgtatgacaccgtgaaaggttccgactatatcggt
gaccaggacgcgattgaatatatgtgtaaaaccggtccggaagcgattctggaactggag
cacatggggctgccgttctcccgtctggatgacggccgcatttatcagcgcccgttcggc
ggtcagtccaagaatttcggcggtgagcaggctgcccgtaccgcggcggcggcggaccgt
accggtcatgcgttgctgcacacgctgtaccagcagaacctgaaaaaccataccacgatc
ttttccgaatggtatgcgctggatctggtgaaaaaccaggatggcgcggtggtgggatgt
accgctatctgcatcgaaaccggcgaagtcgtttatttcaaagcccgcgccaccgtgttg
gcgaccggcggcgcaggccgtatctatcagtccaccaccaacgcccacatcaacaccggc
gacggcgtcggcatggcgctgcgtgccggcgtgccggtgcaggacatggaaatgtggcag
ttccacccgacggggatcgccggtgccggcgtgctggtgaccgaagggtgccgtggtgaa
ggcggttacctgctgaacaaacacggcgagcgtttcatggagcgctatgcgccgaacgcc
aaagatctggcgggacgcgacgtagtggcgcgttccatcatgatcgaaatccgcgaaggc
cgaggctgcgatggcccgtgggggccgcacgccaaactgaagctggaccatctgggcaag
gacgttctcgaatcccgtctgccgggcattctggagctgtcccgcacctttgcgcacgta
gacccggtgaaagagccgattccggttattccgacctgccactacatgatgggcggtatt
ccgaccaaggtaaccggccaggcgctgaccgtgaacgagaagggcgaagacgtggtgatt
ccgggtctgttcgccgtgggcgaaatcgcctgcgtctccgtacacggcgccaaccgtctg
ggcggcaactcgctgcttgatctggtggtgttcggtcgttccgccggtatgcacttgcag
gaatctctggccgaacagggcgatacccgcgacgccagcgattccgatgtcgacgcctcg
ctggaacgtctcaaccgttggaacaatacccgttccggcgaggacccggtggagatccgc
aaggcgctgcaagcctgcatgcagaataacttctcggtattccgcgaaggcgacgcgatg
gcgaaagggctggaagagctgaaagtgatccgcgagcgtctcaacaatgcccgtctggac
gatacttccagcgagttcaacacccagcgcatcgaatgcctggagctggacaacctgatg
gaaaccgcttacgccaccgcggtctcggcaaacttccgcaccgaaagccgtggtgctcac
agccgcttcgactatcctgatcgtgatgacgagaattggttgtgtcattcgctgtatcaa
ccgcaaaccgaaagcatgacgcgccgtgaggtgaacatgcagcctaaactgcgcccggcg
ttcccgccgaaagtgcgtacttattaa
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