Dickeya fangzhongdai ND14b: LH89_08555
Help
Entry
LH89_08555 CDS
T03347
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00470
D-Amino acid metabolism
ced00550
Peptidoglycan biosynthesis
ced01100
Metabolic pathways
ced01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LH89_08555
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LH89_08555
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LH89_08555
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ced01011
]
LH89_08555
Enzymes [BR:
ced01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LH89_08555
Peptidoglycan biosynthesis and degradation proteins [BR:
ced01011
]
Precursor biosynthesis
Amino acid ligase
LH89_08555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATPgrasp_ST
RimK
PTS_2-RNA
Motif
Other DBs
NCBI-ProteinID:
AIR69250
LinkDB
All DBs
Position
1974790..1975890
Genome browser
AA seq
366 aa
AA seq
DB search
MSKIRVGVVFGGKSSEHEVSLQSAKNIVDAIDKTRFDVVLLGIDKQGEWHVNDASNYLLN
ADNPALIALNRTSQNVALIPGQTHHQLIDTASASALSQIDVIFPIVHGTLGEDGSLQGLL
RMANIPFVGSSVLGSAVSMDKDVTKRLLRDAGLQVAPFVTLTRANRARHPYDGVTEQLGL
PLFVKPANQGSSVGVSKVRNQAEFERAVDLAFRYDHKVLVESAIVGREIECAVLGNDYPK
ASLCGEIVLHDEFYSYDTKYINEDGAAVAIPAAMDDEVHQHIRDIALRAFQTLDCQGMAR
VDVFLTPDQQVIVNEVNTLPGFTNISMYPKLWEASGLNYTDLITQLIELALERHAQDSNL
QSSVRE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaattcgggttggcgtggtttttggtggtaaatcctctgagcacgaagtgtca
ctgcagtccgcaaaaaacattgtagacgccattgataaaacgcggttcgatgtggtgttg
ctgggcatcgacaagcaaggggaatggcacgtcaacgacgcctccaactatctgctcaac
gccgataacccggcgctgatcgccctgaaccgcaccagtcagaacgtggcgctgatcccg
ggccaaacccaccatcagttgatcgacaccgccagcgccagcgcgctgtcgcagattgac
gtcattttcccgatcgttcacggcacgctgggcgaagacggttcgctgcaagggctgctg
cgcatggcgaacattccgtttgtcggcagcagcgtgctgggatccgccgtcagcatggac
aaagacgtcaccaaacggttgctgcgcgacgccggcctgcaggtggcgccgttcgtcacc
ctgacccgcgccaaccgcgcgcgccatccttacgatggcgttaccgaacaactggggctg
ccgctgttcgtcaaaccggctaatcagggttcgtccgtcggcgtgagcaaggtacgcaat
caggcggaattcgagcgggcggtggatctggcattccgctacgaccataaagtgctggtg
gagtcggcgattgtcggccgtgaaatcgaatgcgcggtgctgggcaacgactacccgaaa
gctagcctctgcggcgaaatcgtgctgcacgacgagttctactcctacgacaccaaatac
atcaacgaagatggcgcggcggtagcgattccggcggcgatggacgacgaggtgcaccag
catatccgcgatatcgccctgcgggctttccagactctggattgtcagggtatggcgcgg
gtagacgtgttcctgacgccggaccagcaggtcatcgtcaacgaggtcaacaccctgccc
ggtttcaccaacatcagcatgtatccgaaactgtgggaagccagcggcctcaactacacc
gacctgatcacccagttgattgaactggcgctggagcgccacgcgcaggatagcaatctg
caaagctcggtgcgcgagtga
DBGET
integrated database retrieval system
