Celeribacter ethanolicus: CEW89_12550
Help
Entry
CEW89_12550 CDS
T05094
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ceh
Celeribacter ethanolicus
Pathway
ceh00521
Streptomycin biosynthesis
ceh00523
Polyketide sugar unit biosynthesis
ceh00525
Acarbose and validamycin biosynthesis
ceh00541
O-Antigen nucleotide sugar biosynthesis
ceh01100
Metabolic pathways
ceh01110
Biosynthesis of secondary metabolites
ceh01250
Biosynthesis of nucleotide sugars
Module
ceh_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ceh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CEW89_12550 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CEW89_12550 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CEW89_12550 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CEW89_12550 (rfbB)
00525 Acarbose and validamycin biosynthesis
CEW89_12550 (rfbB)
Enzymes [BR:
ceh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CEW89_12550 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
adh_short_C2
Sacchrp_dh_NADP
NmrA
Motif
Other DBs
NCBI-ProteinID:
ATG48319
UniProt:
A0A291GD60
LinkDB
All DBs
Position
complement(2548873..2549922)
Genome browser
AA seq
349 aa
AA seq
DB search
MKVLVTGGAGFIGSAVVRLAVSRGYEVVNVDALTYAACLDNVASVSDSPLYAFEQVDIRD
RAGLDTVFAKHRPDAVMHLAAESHVDRSIDGPGDFIETNITGTFNMLEAARKYWVETGKP
ESFRFHHISTDEVFGSLPNDPAIKFTEDTPYDPRSPYSASKASSDHLVRAWHETYVLPVV
LTNCSNNYGPFHFPEKLIPVIILNALAGKPLPIYGDGSNIRDWLYVEDHADALLLVVEKG
EIGRSYNIGGENERTNLELVKTLCAILDQKRPKSSGSYADQITFVTDRPGHDARYAIDPS
RIREELGWRPSVTVEEGLAQTVVWYLDNEDWWRALQQRHGVGERLGVKA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttctggtgacaggaggcgcggggttcatcggctccgccgtggtgcggcttgcg
gtgtctcgcgggtatgaggtggtgaatgtcgatgcgctgacctatgcggcctgcctcgac
aatgtggcctctgtgtccgacagcccgctctatgcgttcgagcaggtcgatattcgtgat
cgggcgggattggacactgtttttgccaaacataggcccgatgcggtgatgcatctggcc
gccgaaagccatgtggaccgctccatcgacgggccgggcgatttcatcgagacgaatatc
accggcacgttcaacatgctggaggcggcgcgcaaatactgggtcgagacgggcaagccg
gagagcttccgctttcaccacatttcaacggatgaggtgtttggctcgctgcccaacgat
ccggcgatcaagtttaccgaagacaccccctacgacccgcgttcgccctattcggcctcg
aaagccagctcggatcatctggtgcgcgcatggcatgagacctatgtgctgccggtggtt
ctgaccaattgctcgaacaattacggaccgttccacttccctgagaaactcattccggtg
atcatcctgaatgctctggcgggcaagcctctgccgatttacggcgacggctcgaacatt
cgcgattggctttatgtcgaggatcatgccgacgcgctcttgctggtggtcgaaaagggc
gagatcgggcgaagctataatatcggtggcgaaaacgagcggacgaacctcgagctggtg
aaaacgctctgtgccattctcgatcaaaagcgacccaaatccagcggaagttatgccgat
cagatcacttttgtgacggatcgtccgggtcatgatgcgcgctatgcgattgacccgtcg
cgcatccgcgaagaacttggctggcggccctcggtgacggtcgaggaggggctggcgcag
acggtcgtttggtatctcgacaacgaggattggtggcgtgccctgcagcaacgccacggg
gtcggggaacggttgggggttaaggcatga
DBGET
integrated database retrieval system