KEGG   Caenorhabditis elegans (nematode): CELE_D1081.8
Entry
CELE_D1081.8      CDS       T00019                                 
Symbol
cdc-5L
Name
(RefSeq) Cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CELE_D1081.8 (cdc-5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cel03041]
    CELE_D1081.8 (cdc-5L)
   03400 DNA repair and recombination proteins [BR:cel03400]
    CELE_D1081.8 (cdc-5L)
Spliceosome [BR:cel03041]
 Complex B
  Other components
   Prp19 complex
    CELE_D1081.8 (cdc-5L)
 Complex C
   Prp19-CDC5 complex
    CELE_D1081.8 (cdc-5L)
DNA repair and recombination proteins [BR:cel03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    CELE_D1081.8 (cdc-5L)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 DUF3349 DUF637
Other DBs
NCBI-GeneID: 172639
NCBI-ProteinID: NP_492303
WormBase: WBGene00008386
Ensembl: WBGene00008386
UniProt: G5EFC4
LinkDB
Position
I:8491291..8495833
AA seq 755 aa
MVRVIIKGGVWKNTEDEILKAAIMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPGIKK
TEWSREEDEKLLHLAKLMPTQWRTIAPIVGRTSAQCLERYEHLLDEAQRKAEGLDEEATE
TRKLKPGEIDPTPETKPARPDPIDMDDDELEMLSEARARLANTQGKKAKRKARERQLSDA
RRLASLQKRREMRAAGLAFARKFKPKRNQIDYSEEIPFEKHVPAGFHNPSEDRYVVEDAN
QKAIEDHQKPRGREIEMEMRREDREKLKKRKEQGEADAVFNIKEKKRSKLVLPEPQISDR
ELEQIVKIGHASDSVRQYIDGTATSGLLTDYTESARANAVAARTMRTPMLKDTVQLELEN
LMALQNTESALKGGLNTPLHESELGKGVLPTPKVAATPNTVLHAIAATPGTQSQFPGSTP
GGFATPAGSVAATPFRDQMRINEEIAGSALEQKASLKRALASLPTPKNDFEVVGPDDDEV
EGAVEDESNQDEDGWIEDASERAENKAKRNAENRVRNMKMRSQVIQRSLPKPTKVNEQAT
RATNSSADDMVKAEMSKLLAWDVDNKPPSVIYSREELDAAADLIKQEAESGPELNSLMWK
VVEQCTSEIILSKDKFTRIAILPREEQMKALNDEFQMYRGWMNQRAKRAAKVEKKLRVKL
GGYQAIHDKLCKKYQEVTTEIEMANIEKKTFERLGEHELKAINKRVGRLQQEVTTQETRE
KDLQKMYSKLSNKQWKLSQIEIHDAASTTSAPITY
NT seq 2268 nt   +upstreamnt  +downstreamnt
atggtgcgagttattatcaaaggaggtgtgtggaagaatacagaggatgaaatcctcaaa
gcagctattatgaaatacggaaaaaatcaatggagtcgaattgcttcactgttgcacaga
aaatcagcaaaacaatgcaaggctcgttggttcgagtggcttgatccaggaattaaaaag
acagaatggtcacgtgaagaagatgaaaaacttcttcatctcgctaagctgatgccaacg
caatggagaacaattgcaccaattgtcggaagaacatcagcgcagtgcctggaacgatat
gagcatttgctggatgaagctcaacgaaaagcagaaggtcttgatgaagaagctactgaa
actagaaaattaaaacctggagaaatcgatccaacacctgagacaaaaccagcgagacct
gatccaattgacatggatgatgatgaattggaaatgctctctgaggctcgtgcacgtttg
gccaacactcaaggaaaaaaggcgaagagaaaggctcgcgagcgtcagctttctgatgca
cgtcgtctggcttcgcttcaaaaacgaagggagatgcgagcagctggcttagcttttgcc
agaaagttcaagccaaagcgaaaccaaattgactacagtgaggagattccattcgaaaaa
catgttccagctggattccataatccatctgaggacagatatgtcgtggaagatgcaaac
cagaaagccatcgaagatcatcaaaaaccacgtggccgcgaaattgaaatggaaatgcga
cgagaggatcgtgaaaaactgaaaaagcgtaaagaacaaggagaagccgatgcggtattc
aacatcaaagagaaaaaacgttcgaagttggtcctacccgaaccacagatttctgatcgt
gagcttgaacaaatcgtcaagattggtcatgcatctgacagtgttcggcaatatattgac
ggaacagctacaagtggattgctcactgattacactgaatcagcaagagccaatgcagtt
gctgcaagaactatgagaacaccgatgctcaaggatacggttcaattagaactcgaaaac
ctaatggctctacagaataccgaatcagcattgaaaggagggttgaacaccccacttcac
gaatcagaactcggaaaaggcgttctaccaactcccaaagttgcggccactccaaacaca
gttctccatgcaattgcagccacgccaggaactcaatcacagtttcccggatccacacca
ggtggtttcgctactccagctggaagcgttgctgcaactccgttcagagatcaaatgcgt
attaacgaggagattgctggatcagctttagaacaaaaagctagtctgaagcgtgctttg
gccagtctgccaactccaaaaaatgattttgaagtcgttggacctgatgatgatgaagtt
gaaggagctgttgaagatgagagtaaccaagatgaagatggatggattgaagatgcatct
gaaagagctgaaaataaagcaaagagaaatgcggagaatcgtgtcagaaatatgaaaatg
cgatcacaagtcattcaaagatcacttccaaaaccaacaaaagttaacgaacaagctaca
cgggcaaccaactcgtcagcagatgacatggtcaaagccgaaatgagcaaacttcttgct
tgggacgtagacaacaagccaccatcagtaatctactcccgtgaagagcttgatgcggct
gctgatttaatcaaacaagaagctgaatcaggaccagaattgaacagtctaatgtggaaa
gttgtcgaacaatgtacttcggaaattattctgagtaaagataagttcacacgtattgct
atcctaccacgagaagaacagatgaaagctttgaatgatgaattccaaatgtacagagga
tggatgaatcaacgggcgaaacgagctgcaaaagttgagaaaaagctgagagtcaagttg
ggcggttatcaggctattcatgacaagctgtgtaaaaagtatcaggaagtcaccaccgag
attgagatggctaatattgaaaagaaaacttttgaacgtctcggagagcatgagttgaag
gcaatcaacaaacgcgtcgggcgtcttcaacaagaagtcacaacacaagaaactcgggag
aaggatcttcaaaagatgtattcaaagttgtcgaataagcaatggaaactgtctcaaatt
gaaatccacgatgcagcttcaaccacatcagcaccgattacatactaa

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