Caenorhabditis elegans (nematode): CELE_ZK328.7
Help
Entry
CELE_ZK328.7 CDS
T00019
Symbol
ift-139
Name
(RefSeq) Tetratricopeptide repeat protein 21 homolog
KO
K19673
tetratricopeptide repeat protein 21B
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cel03037
]
CELE_ZK328.7 (ift-139)
Cilium and associated proteins [BR:
cel03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
CELE_ZK328.7 (ift-139)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_16
TPR_2
TPR_1
TPR_7
TPR_12
ANAPC3
TPR_11
TPR_8
FAT
TPR_21
Motif
Other DBs
NCBI-GeneID:
175855
NCBI-ProteinID:
NP_001022993
WormBase:
WBGene00022696
Ensembl:
WBGene00022696
UniProt:
Q20255
LinkDB
All DBs
Position
III:complement(<6032563..>6039470)
Genome browser
AA seq
1324 aa
AA seq
DB search
MDSESDDNPNDPEDRKKWGHKDVEHWRAVSNVHYYAREGYFGTAILVCDGRLATIKDPAL
AILKGVCLTLLGKIPDAIRHLETFVTDNDVALGALHALKWAHASAFNPDNKSIVEIETEI
STRARNEKTPYTSYATASEVLYFAGEYQKSKQMLDIARKRATEKHAKHYCLLGWIELALG
KKQKSTQELFEKAGGQEYPDGNIGRCKILEGHHSAPEMKVAANELAISTIHFLPGHIEKA
KASIMMKDWRGVMDCIMNADQPEGSNPYIEVLRTVHGICYAGEVSMLKRTLQLLLKSLDE
NEATNHVLYARITKLLVSISGRDEKILRHARDFLTRALKISRKPDYVALSMRIAFGLGGA
KEVSTLSQELVALDCEDSYAVLSSVVSMLMISRVSDARAQFDILPSAHPKLLESPLYYLI
ASVLAKQSKDKSFENFRQHIENLVEMLRNQLQSFPFGLDYLSLFSSDLLYSAVEQCFDFY
PLVPIKAPDDCMKLTAKTLQMIYDVAPGLAHCTLQLARNSYLCSNTNAAEKWIEKVLDKD
DSLADAHILRAELILDRGGKITDADDALVTGLNFNFKLRETSLYHLIKSKTFKKRNENDE
AIKTLKMALQIPRKEPSKNLFQPKESADTHKISVQLELIDTLQHMKRIQEAETTMTDALA
EWAGQPEQDQLVIAQAQLYLTKGHVERALGILKKIQPGQSNFHLSRIKMAEIYLEEKKDK
RMFAACYRELLKVEATPGSYSLLGDAFMKVQEPEDAINFYEQALKMQSKDVQLAEKIGEA
YVMAHLYSKAVNFYESSMNIYKDKNMRLKLANLLLKLRNFEKCEKVLRAPFERDPEPVGT
ETIQTYIQFLLLLAECHEMMDNVPEAMNDFEKAKSLHSRIQDKTLTAALKKEGARICNLQ
AELLYRRREFSQAVDICKQALAYHETDLKANLLLSKIFKEENKWTLVLQPCQTVIQVDPH
NDEANSILADFYYIRSEAAHASTSYTTLLNTNPQHWHALSRVVELFCRNGEQNAAEKHLD
RAKEVNPRCVTESGYNVCRGRFEWYTGDQNEALRYYSRTKDSAAGWREKALYYMIDICLN
PDNEIIIDENSVENPETTIVEEASEQQKLAKYYLDLLGKLPTTDRFLLAQNFIRMHTTDK
SAIQAALDEFNRMAFNADRSQVTNVGAVFGVARGHVLLKQVQKAKTVLKMVNGRVWNFDD
SDYLEKCWLMLADIYINQNKNDQAVTFLDLVFKYNCNCLKAFELYGYMREKEQKYVEAYK
MYEKAFMATKERNPGFGYKLAFTYLKAKRLFACIETCQKVLDLNPQYPKIKKEIMDKAKA
LIRT
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggattccgaatctgacgataatccaaatgacccagaagatcgcaaaaaatggggacac
aaggatgtggagcactggagagctgtgtccaatgtacattattatgcgagagaaggctat
tttggcacagcaattcttgtgtgcgacgggcggttggctaccataaaagatcctgcactt
gcaattctgaaaggtgtctgtctcactcttctgggaaagattccagatgcaattcgtcat
ttggaaacttttgtgactgataacgatgttgctctgggagccctgcatgcgttgaaatgg
gctcatgcaagtgcttttaacccagataacaaatctatcgtggaaatcgagacagaaatt
tcaacgcgggctagaaatgagaagactccttacacttcgtatgctactgcctctgaggta
ctctactttgccggggagtaccaaaaatccaagcaaatgttggatattgcaagaaaaaga
gcaacggagaagcatgctaaacattattgtctattgggatggattgaattggcattgggg
aagaaacagaaatcaacacaagaactatttgagaaagctgggggacaggagtatcccgat
ggaaatattggacgatgcaaaatccttgaaggtcatcattctgctcctgaaatgaaagta
gctgcaaatgaactcgctatttctaccattcactttttaccaggacacattgaaaaagca
aaagcatcgattatgatgaaagactggagaggagttatggattgtataatgaatgcggat
caaccagaaggaagtaatccttatattgaagtacttcgaactgttcatggaatatgttat
gctggggaagtatcaatgttgaaaagaacacttcaattattattgaagagtttggatgaa
aatgaagcaacaaatcatgtgctgtatgcaagaatcactaaacttcttgtttcaattagt
gggagagatgagaaaatattaagacatgcaagagactttctgactcgagctctaaaaatt
tctcgaaaacctgactatgtcgctctttcaatgagaattgcttttggattgggaggtgcg
aaagaagtttcaactttgtcacaggagcttgtcgcattagattgtgaagattcatatgca
gtattatcaagtgtcgtgtcaatgttaatgatcagtagggtatctgatgcaagagctcag
tttgatattctaccatctgctcatccaaaacttttggaatccccactttattacctcatt
gcctcagtgcttgccaagcaaagcaaagataaatcattcgaaaacttccgtcaacacatt
gaaaatttggttgaaatgcttcgaaatcagcttcaatcatttccattcggcctggactat
ctttccctattcagctcagatctcttatattccgctgttgagcaatgttttgatttctac
cctcttgtacctatcaaagcaccggatgattgcatgaagttgactgcgaaaactcttcaa
atgatctatgacgtggcaccaggacttgctcattgtacactacaacttgctagaaactcg
tacctctgctcaaatacaaatgcagcagagaaatggattgagaaggtcctagacaaggat
gattcattggcagatgctcatattctgcgagctgaattgattctggatagaggtggaaag
atcacagatgctgatgatgctcttgtcactggattaaattttaatttcaaacttcgagag
acatccttgtatcatctgataaaatcaaaaaccttcaagaagagaaatgagaatgacgag
gcaatcaagacattgaaaatggcattgcaaatacctagaaaggagccgtcgaaaaatttg
tttcaaccgaaggaatcagcggatacccataaaatatcagttcaactggagttgattgat
actttgcagcacatgaaaagaattcaagaagccgaaaccactatgactgatgccctcgct
gagtgggcaggtcaaccggaacaagatcagcttgtcattgctcaggcccagttgtacctg
acgaaaggtcacgtggaacgagctctgggcattttgaaaaaaattcagccggggcaatcg
aattttcatttatcacgaataaaaatggcggaaatttatttggaagaaaagaaggataag
cgaatgtttgccgcgtgttacagagaacttctaaaggtagaagccactccaggatcatat
tctcttcttggcgatgcatttatgaaagttcaagaaccagaagatgctattaatttttac
gaacaagccttgaaaatgcaatcaaaagatgttcaactcgctgaaaaaatcggtgaagct
tatgtaatggctcatctctactctaaagctgtcaacttctacgagtcctcaatgaacatt
tataaagacaagaacatgcgtttgaaacttgcaaacttgttgctcaagctgagaaatttt
gaaaagtgcgaaaaagtgttgcgcgctccatttgagcgagatcctgagccagttggcaca
gagactatacagacttatattcaatttttgttgcttttagcagaatgtcatgaaatgatg
gataatgttcctgaagcgatgaacgattttgagaaagccaaatcactacatagtcgcatt
caagataaaactctcacggcggcgctgaaaaaggaaggcgcccgaatttgtaatcttcag
gctgaacttctctacagacgtcgagagttctctcaagccgtcgacatttgcaaacaagca
ctggcctaccatgaaactgaccttaaagctaatttactgttaagcaaaatatttaaggag
gaaaataaatggacgttggtgttgcagccatgtcagactgtgattcaagtggatccgcat
aacgatgaagctaactcaattctggctgatttctattacataagaagtgaagctgcgcat
gcttcaacaagctacacaacacttcttaacactaatcctcaacattggcatgctctatca
agagttgttgagctattctgtcgaaatggggagcaaaatgctgcagagaaacatttggat
cgtgccaaagaagttaaccctagatgcgtaacagaatctggatacaatgtgtgtcgtgga
agattcgaatggtatacaggagatcaaaatgaggcactccgatactattcaagaacaaag
gatagtgctgctggatggagagaaaaagcgttgtattatatgattgatatttgtttgaac
ccagataatgagataattatcgatgagaatagtgtcgagaatccagagacaacaattgtg
gaagaagctagtgaacagcaaaaacttgccaaatattacctcgatctactcggaaaactt
ccaaccactgatcgtttcctgcttgctcaaaattttattcgaatgcatactactgacaaa
tcagccattcaagctgctcttgatgaattcaatcgaatggcatttaatgccgatcgttca
caagttactaatgttggagcagttttcggagttgcaagaggtcatgtcctgcttaaacaa
gttcagaaagcaaaaactgtgttgaagatggtgaatggaagagtttggaattttgatgat
agtgattatttggaaaagtgttggctgatgttggctgatatttacattaatcaaaacaaa
aatgatcaggctgtgacatttttggatttagtctttaagtataactgtaactgtttaaaa
gcctttgagctgtatggttatatgcgggagaaggaacagaaatatgtggaggcttataaa
atgtacgagaaagcatttatggctacaaaagaaaggaatccaggttttggctacaaattg
gcgttcacctatctcaaggcaaagcggctatttgcttgcattgaaacctgccaaaaagta
cttgatctcaatccacagtacccgaaaatcaaaaaggaaattatggataaagcgaaagct
ctaatcagaacttga
DBGET
integrated database retrieval system
