KEGG   Cellulomonas sp. PSBB021: CBP52_03955Help
Entry
CBP52_03955       CDS       T04985                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cez  Cellulomonas sp. PSBB021
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:cez00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    CBP52_03955
   03410 Base excision repair
    CBP52_03955
   03420 Nucleotide excision repair
    CBP52_03955
   03430 Mismatch repair
    CBP52_03955
Enzymes [BR:cez01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CBP52_03955
    6.5.1.6  DNA ligase (ATP or NAD+)
     CBP52_03955
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CBP52_03955
DNA replication proteins [BR:cez03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    CBP52_03955
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     CBP52_03955
DNA repair and recombination proteins [BR:cez03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CBP52_03955
   NER (nucleotide excision repair)
    Other NER factors
     CBP52_03955
   MMR (mismatch exicision repair)
    Other MMR factors
     CBP52_03955
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
LinkDB All DBs
Position
876655..878202
Genome map
AA seq 515 aa AA seqDB search
MLLAEVADTSRALAATRSRLAKRALLVELLRRTPPPDVPLVAHYLGGELRQRRTGLGWRS
LAHLPPPADEPTLTLEEVDATFARMAQLSGAGSGTQRQELAAQLFARATAVEQDLLRGLV
TGELRQGSLDALLLDAVAEAAGVPAAAVRRAAMLAGATAPVASAALGASGPAEAASLLAG
FGLTVGRAVRPMLAQSATDVATALTDVGPGPAVVDAKLDGIRIQVHRRDDEVRVFTRSLD
DVTARVPEIVDLVRSLPGGTLVLDGEALVVDDTGRPVAFQDTASRAATADAQVAARHVLR
PFFFDVLHADGRDLLDEPLRDRLAVLDRLLSDHPAASIDRVVTTDPDEAGAHLREVLAAG
HEGVVVKALDSPYEAGRRGGAWVKVKPRHTLDLVVLAVEWGSGRRRGLLSNIHLGARDAA
GGFVMLGKTFKGMTDEMLRWQTERFTALATSSLDDWVVHVRPEQVVEIAFDGLQRSSRYP
GGVALRFARVLRYRDDKTAAEADTIEAVRALASPA
NT seq 1548 nt NT seq  +upstreamnt  +downstreamnt
atgctgctcgccgaggtcgccgacacgtcccgcgcgctggccgcgacccgctcccggctc
gcgaagcgcgcgctgctggtggagctgctgcgccgcaccccaccgccggacgtgccgctc
gtcgcgcactacctgggcggagagctgcggcagcggcgcacaggcctcggctggcgctcg
ctcgcgcacctgccgcccccggccgacgagccgaccctgacgctcgaggaggtcgacgcg
acgttcgcgcggatggcgcagctgtccggcgccggctcggggacgcagcggcaggagctc
gccgcgcagctgttcgcgcgggcgaccgccgtggagcaggacctcctgcgcggtctggtc
accggcgagctgcgccagggctcgctcgacgcgctgctgctggacgcggtggccgaggcc
gccggcgtgcccgccgccgcggtgcgtcgtgcggcgatgctcgcgggcgcgacggcgccg
gtcgcgtccgcggcgctcggcgcgtccggtcccgcggaggcggcgagcctgctcgccggg
ttcggcctgacggtcgggcgagcggtccgcccgatgctcgcgcagtccgccaccgacgtg
gcgaccgccctcaccgacgtgggtccgggcccggcggtggtcgacgccaagctcgacggc
atccgcatccaggtccaccggcgcgacgacgaggtgcgggtcttcacccgcagcctcgac
gacgtcaccgcccgcgtcccggagatcgtcgacctggtccgctcgttgcccggcgggacg
ctcgtgctcgacggcgaggcgctcgtcgtcgacgacaccggccgtcccgtcgcgttccag
gacacggcctcgcgcgcggcgaccgccgacgcgcaggtcgcggcgcggcacgtgctgcgc
ccgttcttcttcgacgtgctgcacgcggacggtcgtgacctgctcgacgagccgctgcgc
gaccgcctcgccgtgctcgaccgcctgctctccgaccaccccgccgcgagcatcgaccgc
gtcgtgacgaccgaccccgacgaggccggcgcccacctgcgtgaggtgctggcggccggg
cacgagggcgtcgtcgtcaaggcgctcgactcgccctacgaggccggccgccgcggcggc
gcgtgggtcaaggtcaagccgcgccacacgctggacctcgtggtgctcgcggtcgagtgg
ggttccggccgccggcgcggcctgctgtccaacatccacctgggcgcacgcgacgcggcc
ggagggttcgtcatgctcggcaagacgttcaagggcatgaccgacgagatgctgcgctgg
cagaccgagcggttcaccgcgctcgcgacctcgtcgttggacgactgggtggtgcacgtc
cgccccgagcaggtagtcgagatcgcgttcgacggcctccagcgctcgtcgcgctacccg
ggcggcgtggccctgcggttcgcccgcgtgctgcgctaccgcgacgacaagaccgcggcg
gaggcggacacgatcgaggcggtccgcgcgctcgcctcgccggcgtga

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